Strain Fitness in Dechlorosoma suillum PS around Dsui_2410
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
2,561,159 | - | +0.4 | |||
2,561,193 | - | +0.4 | |||
2,561,200 | - | +0.2 | |||
2,561,200 | - | +0.6 | |||
2,561,388 | + | +0.4 | |||
2,561,396 | + | -0.3 | |||
2,561,401 | + | -0.1 | |||
2,561,422 | + | Dsui_2410 | 0.11 | -0.6 | |
2,561,519 | + | Dsui_2410 | 0.21 | -1.2 | |
2,561,596 | + | Dsui_2410 | 0.30 | +0.1 | |
2,561,649 | + | Dsui_2410 | 0.36 | -0.2 | |
2,561,743 | + | Dsui_2410 | 0.46 | -1.1 | |
2,561,743 | + | Dsui_2410 | 0.46 | -0.1 | |
2,561,743 | + | Dsui_2410 | 0.46 | -0.3 | |
2,561,748 | + | Dsui_2410 | 0.47 | -0.2 | |
2,561,874 | + | Dsui_2410 | 0.61 | -0.5 | |
2,561,923 | + | Dsui_2410 | 0.66 | -0.4 | |
2,561,923 | + | Dsui_2410 | 0.66 | +0.7 | |
2,561,923 | + | Dsui_2410 | 0.66 | +0.0 | |
2,561,954 | + | Dsui_2410 | 0.70 | +1.1 | |
2,562,011 | + | Dsui_2410 | 0.76 | +0.3 | |
2,562,034 | + | Dsui_2410 | 0.79 | -0.3 | |
2,562,054 | + | Dsui_2410 | 0.81 | -1.1 | |
2,562,075 | + | Dsui_2410 | 0.83 | -1.7 | |
2,562,107 | + | Dsui_2410 | 0.87 | +0.3 | |
2,562,128 | + | Dsui_2410 | 0.89 | -0.4 | |
2,562,220 | - | +0.3 |
Or see this region's nucleotide sequence