Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2285 and Dsui_2286 are separated by 26 nucleotides Dsui_2286 and Dsui_2287 are separated by 157 nucleotides
Dsui_2285: Dsui_2285 - hypothetical protein, at 2,438,199 to 2,439,014
_2285
Dsui_2286: Dsui_2286 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,439,041 to 2,439,835
_2286
Dsui_2287: Dsui_2287 - aminopeptidase N, at 2,439,993 to 2,442,602
_2287
Position (kb)
2439
2440 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2438.063 kb on + strand at 2438.081 kb on + strand at 2438.081 kb on + strand at 2438.081 kb on + strand at 2438.081 kb on + strand at 2438.086 kb on + strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.089 kb on - strand at 2438.099 kb on + strand at 2438.127 kb on - strand at 2438.148 kb on + strand at 2438.166 kb on - strand at 2438.176 kb on - strand at 2438.188 kb on - strand at 2438.209 kb on - strand at 2438.221 kb on + strand at 2438.236 kb on - strand at 2438.236 kb on - strand at 2438.420 kb on + strand, within Dsui_2285 at 2438.428 kb on - strand, within Dsui_2285 at 2438.428 kb on - strand, within Dsui_2285 at 2438.457 kb on - strand at 2438.488 kb on - strand, within Dsui_2285 at 2438.523 kb on - strand, within Dsui_2285 at 2438.581 kb on - strand, within Dsui_2285 at 2438.595 kb on + strand, within Dsui_2285 at 2438.603 kb on - strand at 2438.704 kb on + strand, within Dsui_2285 at 2438.754 kb on + strand, within Dsui_2285 at 2438.756 kb on - strand, within Dsui_2285 at 2438.759 kb on + strand, within Dsui_2285 at 2438.762 kb on - strand, within Dsui_2285 at 2438.762 kb on - strand, within Dsui_2285 at 2438.766 kb on - strand, within Dsui_2285 at 2438.835 kb on + strand, within Dsui_2285 at 2438.848 kb on - strand, within Dsui_2285 at 2438.849 kb on - strand, within Dsui_2285 at 2438.972 kb on + strand at 2438.990 kb on + strand at 2439.087 kb on - strand at 2439.181 kb on - strand, within Dsui_2286 at 2439.197 kb on - strand, within Dsui_2286 at 2439.212 kb on - strand, within Dsui_2286 at 2439.388 kb on + strand at 2439.483 kb on - strand at 2439.542 kb on + strand at 2439.595 kb on + strand, within Dsui_2286 at 2439.837 kb on - strand at 2439.924 kb on + strand at 2439.924 kb on + strand at 2440.015 kb on + strand at 2440.028 kb on + strand at 2440.037 kb on - strand at 2440.068 kb on - strand at 2440.110 kb on + strand at 2440.233 kb on + strand at 2440.255 kb on + strand, within Dsui_2287 at 2440.255 kb on + strand, within Dsui_2287 at 2440.263 kb on - strand, within Dsui_2287 at 2440.354 kb on + strand, within Dsui_2287 at 2440.432 kb on + strand, within Dsui_2287 at 2440.481 kb on + strand, within Dsui_2287 at 2440.515 kb on - strand, within Dsui_2287 at 2440.534 kb on + strand, within Dsui_2287 at 2440.614 kb on - strand, within Dsui_2287
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 2,438,063 + -1.2 2,438,081 + -0.6 2,438,081 + -2.6 2,438,081 + +0.4 2,438,081 + -0.6 2,438,086 + +0.4 2,438,089 - -0.6 2,438,089 - +0.4 2,438,089 - -1.9 2,438,089 - +0.4 2,438,089 - -1.2 2,438,089 - +0.4 2,438,089 - +0.4 2,438,089 - +0.4 2,438,099 + +0.4 2,438,127 - +0.4 2,438,148 + +0.4 2,438,166 - +0.4 2,438,176 - -0.6 2,438,188 - -0.6 2,438,209 - +0.4 2,438,221 + +0.4 2,438,236 - -0.6 2,438,236 - +0.4 2,438,420 + Dsui_2285 0.27 +0.4 2,438,428 - Dsui_2285 0.28 +0.4 2,438,428 - Dsui_2285 0.28 +0.4 2,438,457 - +0.4 2,438,488 - Dsui_2285 0.35 -0.6 2,438,523 - Dsui_2285 0.40 -1.2 2,438,581 - Dsui_2285 0.47 +0.4 2,438,595 + Dsui_2285 0.49 +0.4 2,438,603 - +0.4 2,438,704 + Dsui_2285 0.62 -1.2 2,438,754 + Dsui_2285 0.68 -1.6 2,438,756 - Dsui_2285 0.68 -1.6 2,438,759 + Dsui_2285 0.69 -1.9 2,438,762 - Dsui_2285 0.69 -1.2 2,438,762 - Dsui_2285 0.69 -2.8 2,438,766 - Dsui_2285 0.69 -1.6 2,438,835 + Dsui_2285 0.78 -1.2 2,438,848 - Dsui_2285 0.80 -0.6 2,438,849 - Dsui_2285 0.80 +0.4 2,438,972 + -0.6 2,438,990 + +0.4 2,439,087 - -0.6 2,439,181 - Dsui_2286 0.18 -0.2 2,439,197 - Dsui_2286 0.20 +0.4 2,439,212 - Dsui_2286 0.22 +0.4 2,439,388 + +0.4 2,439,483 - +0.4 2,439,542 + -0.6 2,439,595 + Dsui_2286 0.70 +0.4 2,439,837 - -0.6 2,439,924 + -2.8 2,439,924 + -1.2 2,440,015 + +0.4 2,440,028 + -2.8 2,440,037 - -0.6 2,440,068 - +0.4 2,440,110 + -1.2 2,440,233 + -0.6 2,440,255 + Dsui_2287 0.10 +0.4 2,440,255 + Dsui_2287 0.10 -0.8 2,440,263 - Dsui_2287 0.10 +0.4 2,440,354 + Dsui_2287 0.14 -0.4 2,440,432 + Dsui_2287 0.17 -0.6 2,440,481 + Dsui_2287 0.19 +0.4 2,440,515 - Dsui_2287 0.20 -0.6 2,440,534 + Dsui_2287 0.21 +0.4 2,440,614 - Dsui_2287 0.24 +0.4
Or see this region's nucleotide sequence