Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1981 and Dsui_1982 are separated by 170 nucleotides Dsui_1982 and Dsui_1983 overlap by 1 nucleotides
Dsui_1981: Dsui_1981 - 23S rRNA (uracil-5-)-methyltransferase RumA, at 2,089,872 to 2,091,167
_1981
Dsui_1982: Dsui_1982 - sulfate adenylyltransferase, large subunit, at 2,091,338 to 2,092,612
_1982
Dsui_1983: Dsui_1983 - sulfate adenylyltransferase, small subunit, at 2,092,612 to 2,093,547
_1983
Position (kb)
2091
2092
2093 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2090.446 kb on + strand, within Dsui_1981 at 2090.472 kb on - strand, within Dsui_1981 at 2090.543 kb on + strand, within Dsui_1981 at 2090.543 kb on + strand, within Dsui_1981 at 2090.551 kb on - strand, within Dsui_1981 at 2090.564 kb on - strand, within Dsui_1981 at 2090.564 kb on - strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.587 kb on + strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.595 kb on - strand, within Dsui_1981 at 2090.596 kb on + strand, within Dsui_1981 at 2090.597 kb on + strand, within Dsui_1981 at 2090.706 kb on - strand, within Dsui_1981 at 2090.739 kb on - strand, within Dsui_1981 at 2090.758 kb on + strand, within Dsui_1981 at 2090.822 kb on + strand, within Dsui_1981 at 2090.900 kb on - strand, within Dsui_1981 at 2090.989 kb on - strand at 2091.002 kb on - strand, within Dsui_1981 at 2091.007 kb on - strand, within Dsui_1981 at 2091.058 kb on + strand at 2091.061 kb on - strand at 2091.066 kb on - strand at 2091.119 kb on + strand at 2091.135 kb on - strand at 2091.142 kb on + strand at 2091.150 kb on - strand at 2091.228 kb on + strand at 2091.241 kb on + strand at 2091.339 kb on - strand at 2091.347 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 2,090,446 + Dsui_1981 0.44 -0.4 2,090,472 - Dsui_1981 0.46 +0.8 2,090,543 + Dsui_1981 0.52 +0.2 2,090,543 + Dsui_1981 0.52 +0.2 2,090,551 - Dsui_1981 0.52 -1.5 2,090,564 - Dsui_1981 0.53 -0.2 2,090,564 - Dsui_1981 0.53 -0.8 2,090,587 + Dsui_1981 0.55 +0.7 2,090,587 + Dsui_1981 0.55 +0.5 2,090,587 + Dsui_1981 0.55 +0.2 2,090,595 - Dsui_1981 0.56 +0.8 2,090,595 - Dsui_1981 0.56 -0.2 2,090,595 - Dsui_1981 0.56 +0.8 2,090,596 + Dsui_1981 0.56 +1.1 2,090,597 + Dsui_1981 0.56 +0.5 2,090,706 - Dsui_1981 0.64 -0.2 2,090,739 - Dsui_1981 0.67 +0.8 2,090,758 + Dsui_1981 0.68 +1.4 2,090,822 + Dsui_1981 0.73 +0.8 2,090,900 - Dsui_1981 0.79 -0.2 2,090,989 - +0.8 2,091,002 - Dsui_1981 0.87 -0.8 2,091,007 - Dsui_1981 0.88 +0.8 2,091,058 + +1.9 2,091,061 - -1.8 2,091,066 - -1.5 2,091,119 + +0.8 2,091,135 - +0.8 2,091,142 + +0.8 2,091,150 - -0.2 2,091,228 + +0.8 2,091,241 + +0.8 2,091,339 - +0.5 2,091,347 - +0.5
Or see this region's nucleotide sequence