Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1113 and Dsui_1114 are separated by 162 nucleotides Dsui_1114 and Dsui_1115 are separated by 92 nucleotides
Dsui_1113: Dsui_1113 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,160,202 to 1,161,038
_1113
Dsui_1114: Dsui_1114 - coenzyme F390 synthetase, at 1,161,201 to 1,162,433
_1114
Dsui_1115: Dsui_1115 - putative acyl-CoA transferase/carnitine dehydratase, at 1,162,526 to 1,163,692
_1115
Position (kb)
1161
1162
1163 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1160.330 kb on + strand, within Dsui_1113 at 1160.511 kb on + strand, within Dsui_1113 at 1160.516 kb on + strand, within Dsui_1113 at 1160.534 kb on - strand, within Dsui_1113 at 1160.650 kb on + strand, within Dsui_1113 at 1160.709 kb on + strand, within Dsui_1113 at 1160.843 kb on + strand, within Dsui_1113 at 1160.920 kb on + strand, within Dsui_1113 at 1160.926 kb on - strand, within Dsui_1113 at 1160.962 kb on - strand at 1161.007 kb on - strand at 1161.044 kb on - strand at 1161.145 kb on - strand at 1161.146 kb on - strand at 1161.327 kb on - strand, within Dsui_1114 at 1161.461 kb on + strand, within Dsui_1114 at 1161.468 kb on + strand, within Dsui_1114 at 1161.488 kb on + strand, within Dsui_1114 at 1161.517 kb on + strand, within Dsui_1114 at 1161.617 kb on - strand, within Dsui_1114 at 1161.687 kb on - strand, within Dsui_1114 at 1161.732 kb on + strand, within Dsui_1114 at 1161.802 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.867 kb on - strand, within Dsui_1114 at 1161.886 kb on + strand, within Dsui_1114 at 1161.931 kb on + strand, within Dsui_1114 at 1161.938 kb on - strand, within Dsui_1114 at 1162.024 kb on - strand, within Dsui_1114 at 1162.129 kb on - strand, within Dsui_1114 at 1162.133 kb on + strand, within Dsui_1114 at 1162.247 kb on - strand, within Dsui_1114 at 1162.280 kb on - strand, within Dsui_1114 at 1162.280 kb on - strand, within Dsui_1114 at 1162.288 kb on - strand, within Dsui_1114 at 1162.352 kb on - strand at 1162.415 kb on + strand at 1162.482 kb on - strand at 1162.540 kb on + strand at 1162.565 kb on - strand at 1162.565 kb on - strand at 1162.596 kb on + strand at 1162.680 kb on + strand, within Dsui_1115 at 1162.690 kb on + strand, within Dsui_1115 at 1163.152 kb on - strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.392 kb on + strand, within Dsui_1115 at 1163.424 kb on - strand, within Dsui_1115 at 1163.427 kb on - strand, within Dsui_1115
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 1,160,330 + Dsui_1113 0.15 -0.8 1,160,511 + Dsui_1113 0.37 -0.8 1,160,516 + Dsui_1113 0.38 -1.8 1,160,534 - Dsui_1113 0.40 +0.2 1,160,650 + Dsui_1113 0.54 +0.2 1,160,709 + Dsui_1113 0.61 -2.4 1,160,843 + Dsui_1113 0.77 +0.2 1,160,920 + Dsui_1113 0.86 +0.2 1,160,926 - Dsui_1113 0.86 +0.2 1,160,962 - +0.2 1,161,007 - -0.8 1,161,044 - -2.1 1,161,145 - -0.8 1,161,146 - -2.6 1,161,327 - Dsui_1114 0.10 +0.2 1,161,461 + Dsui_1114 0.21 +0.2 1,161,468 + Dsui_1114 0.22 -3.1 1,161,488 + Dsui_1114 0.23 +0.2 1,161,517 + Dsui_1114 0.26 -2.4 1,161,617 - Dsui_1114 0.34 +0.2 1,161,687 - Dsui_1114 0.39 +0.2 1,161,732 + Dsui_1114 0.43 -0.8 1,161,802 - Dsui_1114 0.49 +0.2 1,161,809 - Dsui_1114 0.49 -1.8 1,161,809 - Dsui_1114 0.49 -2.4 1,161,867 - Dsui_1114 0.54 -1.8 1,161,886 + Dsui_1114 0.56 -1.4 1,161,931 + Dsui_1114 0.59 -1.4 1,161,938 - Dsui_1114 0.60 +0.2 1,162,024 - Dsui_1114 0.67 +0.2 1,162,129 - Dsui_1114 0.75 +0.2 1,162,133 + Dsui_1114 0.76 -1.4 1,162,247 - Dsui_1114 0.85 -1.4 1,162,280 - Dsui_1114 0.88 +0.2 1,162,280 - Dsui_1114 0.88 -0.8 1,162,288 - Dsui_1114 0.88 +0.2 1,162,352 - -0.8 1,162,415 + -1.8 1,162,482 - -0.8 1,162,540 + +0.2 1,162,565 - +0.2 1,162,565 - -1.4 1,162,596 + -0.8 1,162,680 + Dsui_1115 0.13 +0.2 1,162,690 + Dsui_1115 0.14 -3.1 1,163,152 - Dsui_1115 0.54 +0.2 1,163,365 + Dsui_1115 0.72 -1.4 1,163,365 + Dsui_1115 0.72 +0.2 1,163,392 + Dsui_1115 0.74 -0.8 1,163,424 - Dsui_1115 0.77 +1.2 1,163,427 - Dsui_1115 0.77 -0.0
Or see this region's nucleotide sequence