Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0804 and Dsui_0805 are separated by 200 nucleotides Dsui_0805 and Dsui_0806 are separated by 651 nucleotides
Dsui_0804: Dsui_0804 - hypothetical protein, at 811,179 to 812,312
_0804
Dsui_0805: Dsui_0805 - primosomal protein N'', at 812,513 to 814,537
_0805
Dsui_0806: Dsui_0806 - uroporphyrinogen decarboxylase, at 815,189 to 816,271
_0806
Position (kb)
812
813
814
815 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 811.526 kb on + strand, within Dsui_0804 at 811.589 kb on + strand, within Dsui_0804 at 811.600 kb on + strand, within Dsui_0804 at 811.625 kb on + strand, within Dsui_0804 at 811.731 kb on + strand at 811.746 kb on - strand, within Dsui_0804 at 811.815 kb on + strand, within Dsui_0804 at 811.847 kb on + strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.880 kb on + strand, within Dsui_0804 at 811.884 kb on + strand, within Dsui_0804 at 811.884 kb on + strand at 811.892 kb on - strand, within Dsui_0804 at 811.894 kb on - strand, within Dsui_0804 at 811.902 kb on - strand, within Dsui_0804 at 811.945 kb on + strand, within Dsui_0804 at 811.953 kb on - strand, within Dsui_0804 at 811.955 kb on + strand, within Dsui_0804 at 811.963 kb on - strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.978 kb on - strand, within Dsui_0804 at 812.012 kb on - strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.153 kb on + strand, within Dsui_0804 at 812.232 kb on - strand at 812.266 kb on + strand at 812.332 kb on - strand at 812.346 kb on + strand at 812.353 kb on - strand at 812.354 kb on - strand at 812.459 kb on - strand at 812.485 kb on - strand at 814.583 kb on + strand at 814.584 kb on + strand at 814.584 kb on + strand at 814.608 kb on - strand at 814.659 kb on + strand at 814.671 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.686 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.695 kb on + strand at 814.703 kb on - strand at 814.706 kb on + strand at 814.740 kb on + strand at 814.748 kb on - strand at 814.794 kb on + strand at 814.830 kb on + strand at 814.831 kb on + strand at 814.831 kb on + strand at 814.838 kb on - strand at 814.842 kb on + strand at 814.851 kb on - strand at 814.874 kb on + strand at 814.926 kb on - strand at 814.954 kb on + strand at 814.962 kb on - strand at 814.962 kb on - strand at 814.976 kb on + strand at 814.980 kb on - strand at 815.002 kb on + strand at 815.010 kb on - strand at 815.021 kb on - strand at 815.038 kb on - strand at 815.043 kb on - strand at 815.043 kb on - strand at 815.128 kb on - strand at 815.128 kb on - strand at 815.171 kb on + strand at 815.181 kb on + strand at 815.182 kb on + strand at 815.189 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 811,526 + Dsui_0804 0.31 -1.2 811,589 + Dsui_0804 0.36 -1.2 811,600 + Dsui_0804 0.37 -1.2 811,625 + Dsui_0804 0.39 -2.2 811,731 + -0.7 811,746 - Dsui_0804 0.50 -0.7 811,815 + Dsui_0804 0.56 +0.3 811,847 + Dsui_0804 0.59 -1.7 811,855 - Dsui_0804 0.60 -1.2 811,855 - Dsui_0804 0.60 -1.2 811,880 + Dsui_0804 0.62 -1.2 811,884 + Dsui_0804 0.62 -1.7 811,884 + +0.3 811,892 - Dsui_0804 0.63 +1.9 811,894 - Dsui_0804 0.63 -1.7 811,902 - Dsui_0804 0.64 +0.3 811,945 + Dsui_0804 0.68 -0.7 811,953 - Dsui_0804 0.68 +0.3 811,955 + Dsui_0804 0.68 -0.7 811,963 - Dsui_0804 0.69 -1.7 811,970 + Dsui_0804 0.70 -2.2 811,970 + Dsui_0804 0.70 -2.7 811,978 - Dsui_0804 0.70 -2.0 812,012 - Dsui_0804 0.73 -1.7 812,063 + Dsui_0804 0.78 -2.5 812,063 + Dsui_0804 0.78 -0.7 812,153 + Dsui_0804 0.86 +0.3 812,232 - -0.2 812,266 + -0.7 812,332 - +0.3 812,346 + -2.0 812,353 - -0.8 812,354 - +0.3 812,459 - -0.7 812,485 - +0.6 814,583 + -1.7 814,584 + +0.3 814,584 + -0.7 814,608 - -1.2 814,659 + +0.3 814,671 + +0.3 814,683 + -0.7 814,683 + +0.3 814,683 + -1.2 814,683 + +0.3 814,683 + -0.7 814,683 + -1.7 814,683 + +0.3 814,686 - +0.3 814,691 - -0.7 814,691 - -0.7 814,691 - -0.1 814,691 - +0.3 814,691 - +0.3 814,691 - +0.3 814,695 + +0.3 814,703 - -1.2 814,706 + +0.3 814,740 + +0.3 814,748 - +0.3 814,794 + +0.3 814,830 + -0.7 814,831 + -1.2 814,831 + +0.3 814,838 - -1.7 814,842 + -2.0 814,851 - -1.2 814,874 + -0.7 814,926 - -1.4 814,954 + -0.7 814,962 - -0.7 814,962 - +0.1 814,976 + -0.7 814,980 - -0.5 815,002 + +0.2 815,010 - -2.2 815,021 - +0.3 815,038 - +0.1 815,043 - -1.4 815,043 - -0.2 815,128 - -0.0 815,128 - +0.1 815,171 + +0.3 815,181 + -0.0 815,182 + -0.7 815,189 - +0.2
Or see this region's nucleotide sequence