Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0736 and Dsui_0737 are separated by 82 nucleotides Dsui_0737 and Dsui_0738 are separated by 14 nucleotides Dsui_0738 and Dsui_0739 are separated by 15 nucleotides
Dsui_0736: Dsui_0736 - FAD/FMN-dependent dehydrogenase, at 732,078 to 735,956
_0736
Dsui_0737: Dsui_0737 - hypothetical protein, at 736,039 to 736,134
_0737
Dsui_0738: Dsui_0738 - secondary thiamine-phosphate synthase enzyme, at 736,149 to 736,568
_0738
Dsui_0739: Dsui_0739 - Major Facilitator Superfamily transporter, at 736,584 to 738,125
_0739
Position (kb) 736
737 Strain fitness (log2 ratio) -1
0
1
2 at 736.051 kb on - strand, within Dsui_0737 at 736.063 kb on + strand, within Dsui_0737 at 736.107 kb on + strand, within Dsui_0737 at 736.129 kb on + strand at 736.191 kb on - strand, within Dsui_0738 at 736.506 kb on - strand, within Dsui_0738 at 736.572 kb on - strand at 736.572 kb on - strand at 736.692 kb on + strand at 736.837 kb on - strand, within Dsui_0739 at 736.980 kb on - strand, within Dsui_0739 at 737.049 kb on + strand, within Dsui_0739 at 737.054 kb on + strand, within Dsui_0739 at 737.057 kb on - strand, within Dsui_0739 at 737.062 kb on - strand, within Dsui_0739 at 737.065 kb on + strand, within Dsui_0739
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 736,051 - Dsui_0737 0.12 +1.9 736,063 + Dsui_0737 0.25 +0.2 736,107 + Dsui_0737 0.71 +0.1 736,129 + -0.1 736,191 - Dsui_0738 0.10 -0.9 736,506 - Dsui_0738 0.85 -0.2 736,572 - -0.2 736,572 - -0.6 736,692 + -1.6 736,837 - Dsui_0739 0.16 -0.6 736,980 - Dsui_0739 0.26 -0.0 737,049 + Dsui_0739 0.30 -1.3 737,054 + Dsui_0739 0.30 +0.2 737,057 - Dsui_0739 0.31 -0.5 737,062 - Dsui_0739 0.31 -0.7 737,065 + Dsui_0739 0.31 -1.2
Or see this region's nucleotide sequence