Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0725 and Dsui_0726 are separated by 2 nucleotides Dsui_0726 and Dsui_0727 are separated by 35 nucleotides Dsui_0727 and Dsui_0728 are separated by 101 nucleotides
Dsui_0725: Dsui_0725 - putative hydrolase of the alpha/beta superfamily, at 720,101 to 720,739
_0725
Dsui_0726: Dsui_0726 - ferredoxin, at 720,742 to 721,050
_0726
Dsui_0727: Dsui_0727 - putative integral membrane protein, at 721,086 to 722,141
_0727
Dsui_0728: Dsui_0728 - threonine ammonia-lyase, biosynthetic, long form, at 722,243 to 723,754
_0728
Position (kb) 721
722
723 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 720.138 kb on - strand at 720.207 kb on + strand, within Dsui_0725 at 720.210 kb on - strand, within Dsui_0725 at 720.215 kb on - strand, within Dsui_0725 at 720.215 kb on - strand, within Dsui_0725 at 720.277 kb on - strand, within Dsui_0725 at 720.384 kb on + strand, within Dsui_0725 at 720.461 kb on + strand, within Dsui_0725 at 720.531 kb on - strand, within Dsui_0725 at 720.589 kb on - strand, within Dsui_0725 at 720.664 kb on + strand, within Dsui_0725 at 720.729 kb on - strand at 720.804 kb on + strand at 720.830 kb on - strand, within Dsui_0726 at 720.832 kb on + strand, within Dsui_0726 at 720.845 kb on - strand, within Dsui_0726 at 720.845 kb on - strand, within Dsui_0726 at 720.911 kb on - strand, within Dsui_0726 at 720.958 kb on - strand, within Dsui_0726 at 721.033 kb on + strand at 721.106 kb on + strand at 721.141 kb on - strand at 721.154 kb on + strand at 721.244 kb on + strand, within Dsui_0727 at 721.330 kb on + strand, within Dsui_0727 at 721.358 kb on + strand at 721.397 kb on - strand, within Dsui_0727 at 721.541 kb on + strand, within Dsui_0727 at 721.807 kb on + strand, within Dsui_0727 at 721.917 kb on + strand, within Dsui_0727 at 721.926 kb on - strand, within Dsui_0727 at 721.966 kb on - strand, within Dsui_0727 at 721.977 kb on + strand, within Dsui_0727 at 722.016 kb on - strand at 722.016 kb on - strand, within Dsui_0727 at 722.061 kb on + strand at 722.074 kb on - strand at 722.208 kb on - strand at 722.208 kb on - strand at 722.208 kb on - strand at 722.563 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 720,138 - -0.7 720,207 + Dsui_0725 0.17 -0.8 720,210 - Dsui_0725 0.17 -0.8 720,215 - Dsui_0725 0.18 -0.1 720,215 - Dsui_0725 0.18 -0.2 720,277 - Dsui_0725 0.28 -1.6 720,384 + Dsui_0725 0.44 +0.2 720,461 + Dsui_0725 0.56 +0.2 720,531 - Dsui_0725 0.67 -2.7 720,589 - Dsui_0725 0.76 -0.6 720,664 + Dsui_0725 0.88 +0.2 720,729 - -0.4 720,804 + +0.2 720,830 - Dsui_0726 0.28 -0.2 720,832 + Dsui_0726 0.29 -0.8 720,845 - Dsui_0726 0.33 -0.4 720,845 - Dsui_0726 0.33 -0.0 720,911 - Dsui_0726 0.55 -0.6 720,958 - Dsui_0726 0.70 -0.2 721,033 + +0.2 721,106 + -0.8 721,141 - -0.3 721,154 + -0.8 721,244 + Dsui_0727 0.15 -1.4 721,330 + Dsui_0727 0.23 -2.9 721,358 + +0.2 721,397 - Dsui_0727 0.29 -0.0 721,541 + Dsui_0727 0.43 -1.4 721,807 + Dsui_0727 0.68 -1.4 721,917 + Dsui_0727 0.79 -1.8 721,926 - Dsui_0727 0.80 +0.2 721,966 - Dsui_0727 0.83 -0.2 721,977 + Dsui_0727 0.84 -0.8 722,016 - -0.4 722,016 - Dsui_0727 0.88 -0.2 722,061 + +0.2 722,074 - -0.7 722,208 - -1.7 722,208 - -0.0 722,208 - -0.6 722,563 + -0.8
Or see this region's nucleotide sequence