Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0589 and Dsui_0590 are separated by 8 nucleotides Dsui_0590 and Dsui_0591 are separated by 91 nucleotides Dsui_0591 and Dsui_0592 are separated by 155 nucleotides
Dsui_0589: Dsui_0589 - putative GTPase, G3E family, at 586,512 to 587,507
_0589
Dsui_0590: Dsui_0590 - Fe2+/Zn2+ uptake regulation protein, at 587,516 to 587,956
_0590
Dsui_0591: Dsui_0591 - deoxyribodipyrimidine photolyase, at 588,048 to 589,496
_0591
Dsui_0592: Dsui_0592 - putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon, at 589,652 to 591,292
_0592
Position (kb) 588
589
590 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 587.109 kb on - strand, within Dsui_0589 at 587.119 kb on - strand, within Dsui_0589 at 587.144 kb on - strand, within Dsui_0589 at 587.166 kb on + strand at 587.203 kb on + strand, within Dsui_0589 at 587.280 kb on - strand, within Dsui_0589 at 587.301 kb on - strand, within Dsui_0589 at 587.366 kb on - strand, within Dsui_0589 at 587.431 kb on - strand at 587.500 kb on - strand at 587.540 kb on - strand at 587.596 kb on + strand, within Dsui_0590 at 588.073 kb on + strand at 588.121 kb on + strand at 588.137 kb on - strand at 588.198 kb on + strand at 588.216 kb on - strand, within Dsui_0591 at 588.504 kb on - strand, within Dsui_0591 at 588.650 kb on - strand, within Dsui_0591 at 588.675 kb on - strand, within Dsui_0591 at 588.764 kb on + strand, within Dsui_0591 at 588.764 kb on + strand, within Dsui_0591 at 588.764 kb on + strand, within Dsui_0591 at 588.794 kb on - strand, within Dsui_0591 at 588.892 kb on + strand at 588.892 kb on + strand at 589.053 kb on + strand at 589.118 kb on + strand, within Dsui_0591 at 589.290 kb on + strand, within Dsui_0591 at 589.516 kb on - strand at 589.530 kb on - strand at 589.565 kb on + strand at 589.565 kb on + strand at 589.588 kb on + strand at 589.629 kb on + strand at 589.629 kb on + strand at 589.637 kb on - strand at 589.637 kb on - strand at 589.692 kb on + strand at 589.700 kb on - strand at 589.700 kb on - strand at 589.751 kb on - strand at 589.751 kb on - strand at 589.815 kb on + strand at 589.888 kb on + strand, within Dsui_0592 at 590.046 kb on + strand, within Dsui_0592 at 590.048 kb on - strand, within Dsui_0592 at 590.060 kb on - strand, within Dsui_0592 at 590.191 kb on - strand, within Dsui_0592 at 590.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 587,109 - Dsui_0589 0.60 +0.1 587,119 - Dsui_0589 0.61 -0.2 587,144 - Dsui_0589 0.63 -0.6 587,166 + +0.1 587,203 + Dsui_0589 0.69 -1.9 587,280 - Dsui_0589 0.77 -0.4 587,301 - Dsui_0589 0.79 -0.9 587,366 - Dsui_0589 0.86 +0.4 587,431 - -0.4 587,500 - -0.4 587,540 - +0.3 587,596 + Dsui_0590 0.18 -1.9 588,073 + -2.9 588,121 + -0.4 588,137 - -0.5 588,198 + +0.1 588,216 - Dsui_0591 0.12 +0.0 588,504 - Dsui_0591 0.31 -0.5 588,650 - Dsui_0591 0.42 -0.3 588,675 - Dsui_0591 0.43 -0.3 588,764 + Dsui_0591 0.49 +0.1 588,764 + Dsui_0591 0.49 +0.1 588,764 + Dsui_0591 0.49 -1.9 588,794 - Dsui_0591 0.51 -0.4 588,892 + +0.1 588,892 + +0.1 589,053 + +0.1 589,118 + Dsui_0591 0.74 -1.9 589,290 + Dsui_0591 0.86 -0.9 589,516 - +0.0 589,530 - -1.0 589,565 + +0.1 589,565 + -0.1 589,588 + -0.8 589,629 + -0.0 589,629 + +0.2 589,637 - -1.5 589,637 - -1.9 589,692 + -0.2 589,700 - -0.9 589,700 - +0.1 589,751 - -0.9 589,751 - -0.9 589,815 + +0.5 589,888 + Dsui_0592 0.14 -0.2 590,046 + Dsui_0592 0.24 -0.8 590,048 - Dsui_0592 0.24 -2.2 590,060 - Dsui_0592 0.25 +0.1 590,191 - Dsui_0592 0.33 -1.5 590,195 - +0.1
Or see this region's nucleotide sequence