Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0305 and Dsui_0306 are separated by 136 nucleotides Dsui_0306 and Dsui_0307 are separated by 31 nucleotides
Dsui_0305: Dsui_0305 - transcriptional regulator, at 306,236 to 307,129
_0305
Dsui_0306: Dsui_0306 - putative permease, at 307,266 to 308,054
_0306
Dsui_0307: Dsui_0307 - methyl-accepting chemotaxis protein, at 308,086 to 309,693
_0307
Position (kb) 307
308
309 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 306.286 kb on - strand at 306.323 kb on - strand at 306.333 kb on + strand, within Dsui_0305 at 306.424 kb on + strand, within Dsui_0305 at 306.481 kb on + strand at 306.665 kb on - strand, within Dsui_0305 at 306.692 kb on + strand at 306.715 kb on - strand, within Dsui_0305 at 306.733 kb on + strand, within Dsui_0305 at 306.770 kb on + strand at 306.918 kb on + strand at 306.988 kb on + strand, within Dsui_0305 at 307.077 kb on - strand at 307.109 kb on + strand at 307.369 kb on - strand, within Dsui_0306 at 307.597 kb on - strand, within Dsui_0306 at 307.665 kb on + strand, within Dsui_0306 at 307.714 kb on - strand at 307.803 kb on - strand, within Dsui_0306 at 307.848 kb on - strand, within Dsui_0306 at 307.936 kb on + strand, within Dsui_0306 at 308.070 kb on + strand at 308.120 kb on - strand at 308.315 kb on - strand at 308.402 kb on - strand, within Dsui_0307 at 308.434 kb on - strand, within Dsui_0307 at 308.632 kb on + strand at 308.640 kb on - strand, within Dsui_0307 at 308.667 kb on + strand, within Dsui_0307 at 308.679 kb on + strand, within Dsui_0307 at 308.684 kb on + strand, within Dsui_0307 at 308.694 kb on + strand, within Dsui_0307 at 308.697 kb on - strand, within Dsui_0307 at 308.735 kb on + strand, within Dsui_0307 at 308.769 kb on + strand, within Dsui_0307 at 308.769 kb on + strand, within Dsui_0307 at 308.769 kb on + strand, within Dsui_0307 at 308.777 kb on - strand, within Dsui_0307 at 308.832 kb on + strand, within Dsui_0307 at 308.832 kb on + strand, within Dsui_0307 at 308.832 kb on + strand, within Dsui_0307 at 308.832 kb on + strand, within Dsui_0307 at 308.887 kb on + strand, within Dsui_0307
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 306,286 - -0.3 306,323 - -0.5 306,333 + Dsui_0305 0.11 -3.0 306,424 + Dsui_0305 0.21 -1.8 306,481 + +0.2 306,665 - Dsui_0305 0.48 -0.4 306,692 + +0.2 306,715 - Dsui_0305 0.54 -0.3 306,733 + Dsui_0305 0.56 -2.4 306,770 + +0.2 306,918 + -0.8 306,988 + Dsui_0305 0.84 -0.8 307,077 - -0.4 307,109 + +0.2 307,369 - Dsui_0306 0.13 -2.1 307,597 - Dsui_0306 0.42 -0.8 307,665 + Dsui_0306 0.51 -1.8 307,714 - -0.8 307,803 - Dsui_0306 0.68 -2.6 307,848 - Dsui_0306 0.74 -0.8 307,936 + Dsui_0306 0.85 -0.8 308,070 + +0.2 308,120 - -2.4 308,315 - -0.8 308,402 - Dsui_0307 0.20 +0.2 308,434 - Dsui_0307 0.22 -0.9 308,632 + +0.2 308,640 - Dsui_0307 0.34 +1.5 308,667 + Dsui_0307 0.36 -0.8 308,679 + Dsui_0307 0.37 -1.8 308,684 + Dsui_0307 0.37 +0.2 308,694 + Dsui_0307 0.38 -0.8 308,697 - Dsui_0307 0.38 -0.8 308,735 + Dsui_0307 0.40 -0.8 308,769 + Dsui_0307 0.42 -1.8 308,769 + Dsui_0307 0.42 -0.8 308,769 + Dsui_0307 0.42 -0.8 308,777 - Dsui_0307 0.43 -0.3 308,832 + Dsui_0307 0.46 +0.2 308,832 + Dsui_0307 0.46 -2.1 308,832 + Dsui_0307 0.46 -0.8 308,832 + Dsui_0307 0.46 -0.8 308,887 + Dsui_0307 0.50 -1.4
Or see this region's nucleotide sequence