Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0291 and Dsui_0292 are separated by 33 nucleotides Dsui_0292 and Dsui_0293 are separated by 61 nucleotides Dsui_0293 and Dsui_0294 are separated by 70 nucleotides
Dsui_0291: Dsui_0291 - tellurite resistance protein-like permease, at 290,206 to 291,273
_0291
Dsui_0292: Dsui_0292 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 291,307 to 292,698
_0292
Dsui_0293: Dsui_0293 - PilZ domain-containing protein, at 292,760 to 293,338
_0293
Dsui_0294: Dsui_0294 - D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family, at 293,409 to 294,920
_0294
Position (kb)
291
292
293 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 290.307 kb on + strand at 290.317 kb on - strand, within Dsui_0291 at 290.325 kb on - strand, within Dsui_0291 at 290.339 kb on + strand, within Dsui_0291 at 290.368 kb on + strand, within Dsui_0291 at 290.411 kb on + strand, within Dsui_0291 at 290.449 kb on - strand, within Dsui_0291 at 290.498 kb on - strand, within Dsui_0291 at 290.604 kb on + strand, within Dsui_0291 at 290.671 kb on + strand at 290.755 kb on + strand, within Dsui_0291 at 290.841 kb on + strand, within Dsui_0291 at 290.963 kb on + strand, within Dsui_0291 at 291.024 kb on - strand, within Dsui_0291 at 291.024 kb on - strand, within Dsui_0291 at 291.090 kb on + strand at 291.090 kb on + strand at 291.098 kb on - strand, within Dsui_0291 at 291.189 kb on - strand at 291.194 kb on + strand at 291.202 kb on - strand at 291.205 kb on + strand at 291.208 kb on - strand at 291.214 kb on - strand at 291.214 kb on - strand at 291.360 kb on - strand at 291.771 kb on - strand, within Dsui_0292 at 291.791 kb on + strand, within Dsui_0292 at 291.858 kb on + strand at 291.878 kb on + strand at 291.995 kb on - strand, within Dsui_0292 at 292.013 kb on + strand, within Dsui_0292 at 292.065 kb on - strand at 292.065 kb on - strand, within Dsui_0292 at 292.065 kb on - strand, within Dsui_0292 at 292.118 kb on + strand, within Dsui_0292 at 292.118 kb on - strand at 292.470 kb on + strand at 292.912 kb on + strand at 292.929 kb on - strand, within Dsui_0293 at 292.965 kb on - strand, within Dsui_0293 at 292.966 kb on - strand, within Dsui_0293 at 293.014 kb on + strand, within Dsui_0293 at 293.144 kb on + strand, within Dsui_0293 at 293.209 kb on - strand, within Dsui_0293 at 293.251 kb on - strand, within Dsui_0293 at 293.269 kb on - strand, within Dsui_0293 at 293.343 kb on + strand at 293.519 kb on + strand at 293.591 kb on - strand, within Dsui_0294 at 293.633 kb on + strand, within Dsui_0294 at 293.687 kb on + strand, within Dsui_0294
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 290,307 + +0.2 290,317 - Dsui_0291 0.10 -1.4 290,325 - Dsui_0291 0.11 -1.8 290,339 + Dsui_0291 0.12 -0.8 290,368 + Dsui_0291 0.15 +0.2 290,411 + Dsui_0291 0.19 +0.2 290,449 - Dsui_0291 0.23 -2.6 290,498 - Dsui_0291 0.27 -3.2 290,604 + Dsui_0291 0.37 -2.6 290,671 + +0.2 290,755 + Dsui_0291 0.51 +0.2 290,841 + Dsui_0291 0.59 -1.8 290,963 + Dsui_0291 0.71 +0.2 291,024 - Dsui_0291 0.77 -2.6 291,024 - Dsui_0291 0.77 +0.2 291,090 + +0.2 291,090 + +0.2 291,098 - Dsui_0291 0.84 -0.8 291,189 - +0.2 291,194 + +0.2 291,202 - -0.8 291,205 + +0.2 291,208 - -1.8 291,214 - -0.8 291,214 - -2.1 291,360 - -1.0 291,771 - Dsui_0292 0.33 -2.6 291,791 + Dsui_0292 0.35 -2.6 291,858 + +0.2 291,878 + +0.2 291,995 - Dsui_0292 0.49 -1.4 292,013 + Dsui_0292 0.51 -0.8 292,065 - -1.8 292,065 - Dsui_0292 0.54 +0.6 292,065 - Dsui_0292 0.54 -1.0 292,118 + Dsui_0292 0.58 +0.2 292,118 - +0.2 292,470 + -1.8 292,912 + +0.2 292,929 - Dsui_0293 0.29 +0.4 292,965 - Dsui_0293 0.35 -0.1 292,966 - Dsui_0293 0.36 -0.2 293,014 + Dsui_0293 0.44 -0.8 293,144 + Dsui_0293 0.66 +0.2 293,209 - Dsui_0293 0.78 -0.3 293,251 - Dsui_0293 0.85 -0.7 293,269 - Dsui_0293 0.88 -0.1 293,343 + -2.2 293,519 + +0.2 293,591 - Dsui_0294 0.12 +0.2 293,633 + Dsui_0294 0.15 -1.4 293,687 + Dsui_0294 0.18 -0.8
Or see this region's nucleotide sequence