Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0278 and Dsui_0279 are separated by 10 nucleotides Dsui_0279 and Dsui_0280 overlap by 4 nucleotides Dsui_0280 and Dsui_0281 overlap by 1 nucleotides Dsui_0281 and Dsui_0282 are separated by 416 nucleotides
Dsui_0278: Dsui_0278 - K+-transporting ATPase, B subunit, at 278,099 to 280,177
_0278
Dsui_0279: Dsui_0279 - K+-transporting ATPase, KdpA, at 280,188 to 281,996
_0279
Dsui_0280: Dsui_0280 - F subunit of K+-transporting ATPase (Potass_KdpF), at 281,993 to 282,085
_0280
Dsui_0281: Dsui_0281 - hypothetical protein, at 282,085 to 282,174
_0281
Dsui_0282: Dsui_0282 - hypothetical protein, at 282,591 to 283,034
_0282
Position (kb) 280
281
282 Strain fitness (log2 ratio) -2
-1
0
1 at 279.498 kb on - strand, within Dsui_0278 at 279.732 kb on + strand, within Dsui_0278 at 279.810 kb on - strand, within Dsui_0278 at 279.819 kb on + strand at 279.884 kb on + strand, within Dsui_0278 at 279.892 kb on - strand, within Dsui_0278 at 279.972 kb on - strand at 279.972 kb on - strand at 280.048 kb on - strand at 280.192 kb on - strand at 280.235 kb on - strand at 280.414 kb on + strand at 280.418 kb on + strand, within Dsui_0279 at 280.529 kb on - strand, within Dsui_0279 at 280.572 kb on + strand at 280.811 kb on - strand, within Dsui_0279 at 280.811 kb on - strand, within Dsui_0279 at 280.874 kb on + strand at 280.883 kb on - strand, within Dsui_0279 at 280.952 kb on - strand, within Dsui_0279 at 281.353 kb on - strand, within Dsui_0279 at 281.364 kb on + strand at 281.432 kb on + strand, within Dsui_0279 at 281.448 kb on - strand, within Dsui_0279 at 281.467 kb on + strand at 281.482 kb on - strand, within Dsui_0279 at 281.589 kb on + strand, within Dsui_0279 at 281.610 kb on + strand, within Dsui_0279 at 281.618 kb on - strand, within Dsui_0279 at 281.628 kb on + strand at 281.684 kb on + strand, within Dsui_0279 at 281.692 kb on - strand, within Dsui_0279 at 281.694 kb on + strand, within Dsui_0279 at 281.706 kb on + strand, within Dsui_0279 at 281.750 kb on - strand at 281.813 kb on - strand at 281.887 kb on + strand at 281.899 kb on + strand at 281.945 kb on - strand at 282.017 kb on - strand, within Dsui_0280 at 282.017 kb on - strand, within Dsui_0280 at 282.017 kb on - strand, within Dsui_0280 at 282.056 kb on + strand, within Dsui_0280 at 282.071 kb on + strand, within Dsui_0280 at 282.166 kb on - strand at 282.201 kb on - strand at 282.257 kb on - strand at 282.426 kb on - strand at 282.589 kb on + strand at 282.589 kb on + strand at 282.669 kb on - strand, within Dsui_0282 at 282.737 kb on - strand, within Dsui_0282 at 282.878 kb on - strand, within Dsui_0282 at 282.887 kb on + strand, within Dsui_0282 at 282.902 kb on + strand, within Dsui_0282 at 282.910 kb on - strand, within Dsui_0282 at 282.910 kb on - strand, within Dsui_0282 at 282.953 kb on + strand, within Dsui_0282 at 282.961 kb on - strand, within Dsui_0282
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 279,498 - Dsui_0278 0.67 -2.4 279,732 + Dsui_0278 0.79 -0.8 279,810 - Dsui_0278 0.82 -0.8 279,819 + +0.2 279,884 + Dsui_0278 0.86 -2.6 279,892 - Dsui_0278 0.86 -1.8 279,972 - +0.2 279,972 - +0.2 280,048 - -0.8 280,192 - -1.4 280,235 - -0.8 280,414 + +0.2 280,418 + Dsui_0279 0.13 -0.8 280,529 - Dsui_0279 0.19 -1.4 280,572 + +0.2 280,811 - Dsui_0279 0.34 -0.8 280,811 - Dsui_0279 0.34 +0.2 280,874 + +0.2 280,883 - Dsui_0279 0.38 -1.4 280,952 - Dsui_0279 0.42 +0.2 281,353 - Dsui_0279 0.64 -0.8 281,364 + +0.2 281,432 + Dsui_0279 0.69 +0.2 281,448 - Dsui_0279 0.70 +0.2 281,467 + -1.4 281,482 - Dsui_0279 0.72 +0.2 281,589 + Dsui_0279 0.77 -2.5 281,610 + Dsui_0279 0.79 +0.2 281,618 - Dsui_0279 0.79 -2.1 281,628 + +0.2 281,684 + Dsui_0279 0.83 +0.2 281,692 - Dsui_0279 0.83 -2.6 281,694 + Dsui_0279 0.83 +0.2 281,706 + Dsui_0279 0.84 -2.6 281,750 - +0.2 281,813 - +0.2 281,887 + +0.2 281,899 + +0.2 281,945 - +0.2 282,017 - Dsui_0280 0.26 -2.1 282,017 - Dsui_0280 0.26 -1.8 282,017 - Dsui_0280 0.26 +0.2 282,056 + Dsui_0280 0.68 +0.2 282,071 + Dsui_0280 0.84 -1.4 282,166 - +0.2 282,201 - -1.4 282,257 - +0.2 282,426 - -1.4 282,589 + +0.1 282,589 + -0.3 282,669 - Dsui_0282 0.18 -1.1 282,737 - Dsui_0282 0.33 -0.2 282,878 - Dsui_0282 0.65 +0.2 282,887 + Dsui_0282 0.67 -0.8 282,902 + Dsui_0282 0.70 +0.2 282,910 - Dsui_0282 0.72 +0.1 282,910 - Dsui_0282 0.72 -0.4 282,953 + Dsui_0282 0.82 +0.2 282,961 - Dsui_0282 0.83 -1.1
Or see this region's nucleotide sequence