Strain Fitness in Dechlorosoma suillum PS around Dsui_0203
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
201,185 | - | Dsui_0201 | 0.25 | +0.2 | |
201,195 | + | Dsui_0201 | 0.26 | -0.8 | |
201,231 | - | Dsui_0201 | 0.31 | -1.4 | |
201,299 | + | Dsui_0201 | 0.40 | +0.2 | |
201,322 | - | Dsui_0201 | 0.43 | +0.2 | |
201,367 | - | Dsui_0201 | 0.49 | -0.8 | |
201,427 | + | Dsui_0201 | 0.57 | -0.8 | |
201,510 | - | Dsui_0201 | 0.67 | +0.2 | |
201,757 | - | +0.2 | |||
201,850 | - | Dsui_0202 | 0.26 | +0.2 | |
201,881 | - | Dsui_0202 | 0.35 | +0.2 | |
201,881 | - | +0.2 | |||
202,083 | - | +0.2 | |||
202,122 | - | +0.2 | |||
202,137 | + | +0.2 | |||
202,156 | - | Dsui_0203 | 0.17 | -1.4 | |
202,183 | - | Dsui_0203 | 0.27 | -2.1 | |
202,380 | - | -1.4 | |||
202,412 | + | -0.8 | |||
202,413 | + | -0.8 | |||
202,559 | + | -0.8 | |||
202,567 | - | -1.4 | |||
202,567 | - | -1.4 | |||
202,569 | + | -0.8 | |||
202,654 | + | Dsui_0204 | 0.11 | +0.2 | |
202,659 | + | Dsui_0204 | 0.11 | -0.8 | |
202,962 | + | Dsui_0204 | 0.23 | -1.4 | |
202,963 | - | Dsui_0204 | 0.24 | -2.6 | |
202,963 | - | Dsui_0204 | 0.24 | -0.8 | |
203,124 | + | +0.2 | |||
203,273 | + | Dsui_0204 | 0.36 | -0.8 | |
203,322 | + | Dsui_0204 | 0.38 | +0.2 | |
203,342 | + | Dsui_0204 | 0.39 | -0.8 | |
203,359 | + | Dsui_0204 | 0.40 | -3.0 |
Or see this region's nucleotide sequence