Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0194 and Dsui_0195 are separated by 102 nucleotides Dsui_0195 and Dsui_0196 are separated by 73 nucleotides
Dsui_0194: Dsui_0194 - phage putative head morphogenesis protein, SPP1 gp7 family, at 193,300 to 196,020
_0194
Dsui_0195: Dsui_0195 - Caudovirus prohead protease, at 196,123 to 197,463
_0195
Dsui_0196: Dsui_0196 - hypothetical protein, at 197,537 to 199,060
_0196
Position (kb) 196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 195.204 kb on + strand, within Dsui_0194 at 195.231 kb on - strand, within Dsui_0194 at 195.263 kb on - strand, within Dsui_0194 at 195.278 kb on + strand, within Dsui_0194 at 195.337 kb on - strand, within Dsui_0194 at 195.630 kb on + strand, within Dsui_0194 at 195.630 kb on + strand at 195.638 kb on - strand, within Dsui_0194 at 195.727 kb on + strand, within Dsui_0194 at 195.838 kb on + strand at 195.857 kb on - strand at 196.075 kb on + strand at 196.163 kb on - strand at 196.184 kb on + strand at 196.192 kb on + strand at 196.205 kb on - strand at 196.208 kb on + strand at 196.470 kb on + strand, within Dsui_0195 at 196.698 kb on - strand, within Dsui_0195 at 196.712 kb on - strand, within Dsui_0195 at 196.757 kb on + strand, within Dsui_0195 at 196.775 kb on - strand, within Dsui_0195 at 196.933 kb on - strand, within Dsui_0195 at 197.133 kb on + strand, within Dsui_0195 at 197.178 kb on - strand, within Dsui_0195 at 197.189 kb on - strand, within Dsui_0195 at 197.276 kb on - strand, within Dsui_0195 at 197.302 kb on + strand, within Dsui_0195 at 197.302 kb on + strand, within Dsui_0195 at 197.315 kb on - strand, within Dsui_0195 at 197.327 kb on - strand, within Dsui_0195 at 197.380 kb on + strand at 197.405 kb on - strand at 197.541 kb on - strand at 197.590 kb on - strand at 197.660 kb on + strand at 197.685 kb on + strand at 197.688 kb on - strand at 197.759 kb on + strand, within Dsui_0196 at 197.881 kb on - strand, within Dsui_0196 at 197.889 kb on + strand, within Dsui_0196 at 197.889 kb on + strand, within Dsui_0196 at 197.926 kb on + strand, within Dsui_0196 at 197.932 kb on + strand, within Dsui_0196 at 197.935 kb on - strand, within Dsui_0196 at 197.990 kb on - strand, within Dsui_0196 at 198.032 kb on - strand, within Dsui_0196 at 198.032 kb on - strand, within Dsui_0196 at 198.071 kb on + strand, within Dsui_0196 at 198.126 kb on + strand, within Dsui_0196 at 198.160 kb on - strand, within Dsui_0196 at 198.245 kb on + strand, within Dsui_0196 at 198.273 kb on - strand, within Dsui_0196 at 198.293 kb on - strand, within Dsui_0196 at 198.333 kb on + strand, within Dsui_0196 at 198.423 kb on - strand, within Dsui_0196
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 195,204 + Dsui_0194 0.70 -1.8 195,231 - Dsui_0194 0.71 -1.4 195,263 - Dsui_0194 0.72 +0.2 195,278 + Dsui_0194 0.73 +0.2 195,337 - Dsui_0194 0.75 -2.6 195,630 + Dsui_0194 0.86 -0.8 195,630 + +0.2 195,638 - Dsui_0194 0.86 +0.2 195,727 + Dsui_0194 0.89 +0.2 195,838 + -0.8 195,857 - -1.4 196,075 + +0.2 196,163 - +0.2 196,184 + +0.2 196,192 + -1.4 196,205 - -1.8 196,208 + +0.2 196,470 + Dsui_0195 0.26 -2.6 196,698 - Dsui_0195 0.43 -2.8 196,712 - Dsui_0195 0.44 +0.2 196,757 + Dsui_0195 0.47 -2.4 196,775 - Dsui_0195 0.49 +0.2 196,933 - Dsui_0195 0.60 -0.8 197,133 + Dsui_0195 0.75 -0.8 197,178 - Dsui_0195 0.79 +0.2 197,189 - Dsui_0195 0.79 -0.8 197,276 - Dsui_0195 0.86 -1.4 197,302 + Dsui_0195 0.88 -1.8 197,302 + Dsui_0195 0.88 +0.2 197,315 - Dsui_0195 0.89 -1.8 197,327 - Dsui_0195 0.90 +0.2 197,380 + +0.2 197,405 - +0.2 197,541 - +0.2 197,590 - -0.8 197,660 + +0.2 197,685 + +0.2 197,688 - +0.2 197,759 + Dsui_0196 0.15 +0.2 197,881 - Dsui_0196 0.23 -0.8 197,889 + Dsui_0196 0.23 +0.2 197,889 + Dsui_0196 0.23 +0.2 197,926 + Dsui_0196 0.26 -0.8 197,932 + Dsui_0196 0.26 +0.2 197,935 - Dsui_0196 0.26 -0.8 197,990 - Dsui_0196 0.30 -1.4 198,032 - Dsui_0196 0.32 +0.2 198,032 - Dsui_0196 0.32 -1.4 198,071 + Dsui_0196 0.35 -1.4 198,126 + Dsui_0196 0.39 +0.2 198,160 - Dsui_0196 0.41 -0.8 198,245 + Dsui_0196 0.46 -2.1 198,273 - Dsui_0196 0.48 +0.2 198,293 - Dsui_0196 0.50 -2.4 198,333 + Dsui_0196 0.52 -2.1 198,423 - Dsui_0196 0.58 +0.2
Or see this region's nucleotide sequence