Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0183 and Dsui_0184 are separated by 187 nucleotides Dsui_0184 and Dsui_0185 are separated by 30 nucleotides Dsui_0185 and Dsui_0186 are separated by 23 nucleotides
Dsui_0183: Dsui_0183 - SOS response transcriptional repressor, RecA-mediated autopeptidase, at 184,334 to 184,930
_0183
Dsui_0184: Dsui_0184 - putative transcriptional regulator, at 185,118 to 185,351
_0184
Dsui_0185: Dsui_0185 - hypothetical protein, at 185,382 to 185,846
_0185
Dsui_0186: Dsui_0186 - DNA/RNA helicase, superfamily II, SNF2 family, at 185,870 to 188,398
_0186
Position (kb)
185
186 Strain fitness (log2 ratio)
-2
-1
0
1 at 185.099 kb on - strand at 185.108 kb on - strand at 185.161 kb on - strand, within Dsui_0184 at 185.270 kb on - strand, within Dsui_0184 at 185.397 kb on + strand at 185.510 kb on - strand, within Dsui_0185 at 185.554 kb on - strand, within Dsui_0185 at 185.592 kb on - strand, within Dsui_0185 at 185.665 kb on + strand, within Dsui_0185 at 185.776 kb on + strand, within Dsui_0185 at 185.843 kb on - strand at 185.843 kb on - strand at 185.843 kb on - strand at 185.848 kb on - strand at 185.885 kb on - strand at 185.898 kb on - strand at 185.907 kb on + strand at 185.907 kb on + strand at 186.096 kb on - strand at 186.107 kb on + strand at 186.107 kb on + strand at 186.115 kb on - strand at 186.120 kb on - strand at 186.243 kb on + strand, within Dsui_0186 at 186.325 kb on - strand, within Dsui_0186 at 186.325 kb on - strand, within Dsui_0186 at 186.325 kb on - strand, within Dsui_0186 at 186.410 kb on + strand, within Dsui_0186 at 186.485 kb on + strand, within Dsui_0186 at 186.485 kb on + strand, within Dsui_0186 at 186.630 kb on + strand, within Dsui_0186 at 186.713 kb on + strand, within Dsui_0186 at 186.713 kb on + strand, within Dsui_0186 at 186.828 kb on + strand, within Dsui_0186
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 185,099 - -1.8 185,108 - -0.8 185,161 - Dsui_0184 0.18 +0.2 185,270 - Dsui_0184 0.65 -0.8 185,397 + +0.2 185,510 - Dsui_0185 0.28 +1.2 185,554 - Dsui_0185 0.37 -1.8 185,592 - Dsui_0185 0.45 -0.8 185,665 + Dsui_0185 0.61 -0.8 185,776 + Dsui_0185 0.85 +0.2 185,843 - +0.2 185,843 - -1.4 185,843 - +0.2 185,848 - -1.4 185,885 - +0.2 185,898 - +0.2 185,907 + +0.2 185,907 + -1.8 186,096 - -0.8 186,107 + +0.2 186,107 + +0.2 186,115 - -1.4 186,120 - +0.2 186,243 + Dsui_0186 0.15 -0.8 186,325 - Dsui_0186 0.18 +0.2 186,325 - Dsui_0186 0.18 -1.4 186,325 - Dsui_0186 0.18 -1.4 186,410 + Dsui_0186 0.21 +0.2 186,485 + Dsui_0186 0.24 +0.2 186,485 + Dsui_0186 0.24 -2.6 186,630 + Dsui_0186 0.30 +0.2 186,713 + Dsui_0186 0.33 -1.8 186,713 + Dsui_0186 0.33 -0.8 186,828 + Dsui_0186 0.38 -0.8
Or see this region's nucleotide sequence