Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0175 and Dsui_0176 are separated by 2 nucleotides Dsui_0176 and Dsui_0177 are separated by 171 nucleotides
Dsui_0175: Dsui_0175 - hypothetical protein, at 178,073 to 179,881
_0175
Dsui_0176: Dsui_0176 - ribosome modulation factor, at 179,884 to 180,588
_0176
Dsui_0177: Dsui_0177 - hypothetical protein, at 180,760 to 181,641
_0177
Position (kb) 179
180
181 Strain fitness (log2 ratio) -2
-1
0
1 at 179.097 kb on + strand, within Dsui_0175 at 179.313 kb on + strand, within Dsui_0175 at 179.358 kb on - strand at 179.510 kb on + strand, within Dsui_0175 at 179.690 kb on + strand at 179.698 kb on - strand at 179.728 kb on - strand at 179.738 kb on + strand at 179.776 kb on + strand at 179.840 kb on + strand at 179.851 kb on - strand at 179.930 kb on + strand at 180.027 kb on - strand at 180.077 kb on + strand, within Dsui_0176 at 180.195 kb on + strand, within Dsui_0176 at 180.288 kb on - strand, within Dsui_0176 at 180.365 kb on - strand at 180.403 kb on - strand, within Dsui_0176 at 180.470 kb on + strand, within Dsui_0176 at 180.470 kb on + strand at 180.478 kb on - strand at 180.478 kb on - strand, within Dsui_0176 at 180.726 kb on - strand at 181.007 kb on - strand, within Dsui_0177 at 181.034 kb on + strand, within Dsui_0177 at 181.145 kb on - strand, within Dsui_0177 at 181.184 kb on + strand at 181.184 kb on + strand, within Dsui_0177 at 181.216 kb on + strand, within Dsui_0177 at 181.387 kb on - strand, within Dsui_0177 at 181.390 kb on + strand at 181.398 kb on - strand, within Dsui_0177 at 181.467 kb on + strand, within Dsui_0177 at 181.503 kb on + strand, within Dsui_0177 at 181.511 kb on - strand, within Dsui_0177 at 181.514 kb on + strand, within Dsui_0177 at 181.564 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 179,097 + Dsui_0175 0.57 +0.2 179,313 + Dsui_0175 0.69 +0.2 179,358 - +0.2 179,510 + Dsui_0175 0.79 -2.1 179,690 + +0.2 179,698 - -1.4 179,728 - +0.2 179,738 + -0.8 179,776 + +0.2 179,840 + -2.4 179,851 - +0.2 179,930 + +0.2 180,027 - -0.8 180,077 + Dsui_0176 0.27 -2.4 180,195 + Dsui_0176 0.44 -0.8 180,288 - Dsui_0176 0.57 -0.8 180,365 - -1.4 180,403 - Dsui_0176 0.74 +0.2 180,470 + Dsui_0176 0.83 -2.1 180,470 + +0.2 180,478 - -0.8 180,478 - Dsui_0176 0.84 -1.8 180,726 - -0.8 181,007 - Dsui_0177 0.28 +0.2 181,034 + Dsui_0177 0.31 -0.8 181,145 - Dsui_0177 0.44 -2.4 181,184 + +0.2 181,184 + Dsui_0177 0.48 -2.6 181,216 + Dsui_0177 0.52 +0.8 181,387 - Dsui_0177 0.71 +0.2 181,390 + +0.2 181,398 - Dsui_0177 0.72 +0.2 181,467 + Dsui_0177 0.80 -1.4 181,503 + Dsui_0177 0.84 -1.4 181,511 - Dsui_0177 0.85 +0.2 181,514 + Dsui_0177 0.85 -0.8 181,564 + -0.8
Or see this region's nucleotide sequence