Strain Fitness in Dechlorosoma suillum PS around Dsui_0176
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
179,097 | + | Dsui_0175 | 0.57 | +0.2 | |
179,313 | + | Dsui_0175 | 0.69 | +0.2 | |
179,358 | - | +0.2 | |||
179,510 | + | Dsui_0175 | 0.79 | -2.1 | |
179,690 | + | +0.2 | |||
179,698 | - | -1.4 | |||
179,728 | - | +0.2 | |||
179,738 | + | -0.8 | |||
179,776 | + | +0.2 | |||
179,840 | + | -2.4 | |||
179,851 | - | +0.2 | |||
179,930 | + | +0.2 | |||
180,027 | - | -0.8 | |||
180,077 | + | Dsui_0176 | 0.27 | -2.4 | |
180,195 | + | Dsui_0176 | 0.44 | -0.8 | |
180,288 | - | Dsui_0176 | 0.57 | -0.8 | |
180,365 | - | -1.4 | |||
180,403 | - | Dsui_0176 | 0.74 | +0.2 | |
180,470 | + | Dsui_0176 | 0.83 | -2.1 | |
180,470 | + | +0.2 | |||
180,478 | - | -0.8 | |||
180,478 | - | Dsui_0176 | 0.84 | -1.8 | |
180,726 | - | -0.8 | |||
181,007 | - | Dsui_0177 | 0.28 | +0.2 | |
181,034 | + | Dsui_0177 | 0.31 | -0.8 | |
181,145 | - | Dsui_0177 | 0.44 | -2.4 | |
181,184 | + | +0.2 | |||
181,184 | + | Dsui_0177 | 0.48 | -2.6 | |
181,216 | + | Dsui_0177 | 0.52 | +0.8 | |
181,387 | - | Dsui_0177 | 0.71 | +0.2 | |
181,390 | + | +0.2 | |||
181,398 | - | Dsui_0177 | 0.72 | +0.2 | |
181,467 | + | Dsui_0177 | 0.80 | -1.4 | |
181,503 | + | Dsui_0177 | 0.84 | -1.4 | |
181,511 | - | Dsui_0177 | 0.85 | +0.2 | |
181,514 | + | Dsui_0177 | 0.85 | -0.8 | |
181,564 | + | -0.8 |
Or see this region's nucleotide sequence