Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0117 and Dsui_0118 are separated by 153 nucleotides Dsui_0118 and Dsui_0119 are separated by 31 nucleotides Dsui_0119 and Dsui_0120 are separated by 1 nucleotides
Dsui_0117: Dsui_0117 - methyl-accepting chemotaxis protein, at 114,967 to 116,610
_0117
Dsui_0118: Dsui_0118 - monothiol glutaredoxin, Grx4 family, at 116,764 to 117,084
_0118
Dsui_0119: Dsui_0119 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 117,116 to 117,961
_0119
Dsui_0120: Dsui_0120 - peptide chain release factor 1, at 117,963 to 119,060
_0120
Position (kb)
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 116.125 kb on + strand at 116.127 kb on + strand at 116.137 kb on - strand, within Dsui_0117 at 116.146 kb on + strand, within Dsui_0117 at 116.207 kb on + strand, within Dsui_0117 at 116.256 kb on - strand, within Dsui_0117 at 116.281 kb on - strand, within Dsui_0117 at 116.290 kb on - strand, within Dsui_0117 at 116.329 kb on - strand, within Dsui_0117 at 116.331 kb on + strand, within Dsui_0117 at 116.339 kb on - strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.387 kb on - strand, within Dsui_0117 at 116.387 kb on - strand, within Dsui_0117 at 116.509 kb on + strand at 116.509 kb on + strand at 116.592 kb on + strand at 116.592 kb on + strand at 116.759 kb on - strand at 116.759 kb on - strand at 116.762 kb on + strand at 116.762 kb on + strand at 116.769 kb on - strand at 116.775 kb on - strand at 116.870 kb on + strand, within Dsui_0118 at 116.922 kb on - strand, within Dsui_0118 at 116.939 kb on + strand, within Dsui_0118 at 116.957 kb on - strand, within Dsui_0118 at 116.970 kb on - strand, within Dsui_0118 at 116.974 kb on - strand, within Dsui_0118 at 117.036 kb on - strand, within Dsui_0118 at 117.069 kb on + strand at 117.094 kb on - strand at 117.931 kb on - strand at 117.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 116,125 + +0.2 116,127 + +0.2 116,137 - Dsui_0117 0.71 +0.2 116,146 + Dsui_0117 0.72 -1.4 116,207 + Dsui_0117 0.75 -1.8 116,256 - Dsui_0117 0.78 -0.7 116,281 - Dsui_0117 0.80 -0.2 116,290 - Dsui_0117 0.80 -0.6 116,329 - Dsui_0117 0.83 -1.0 116,331 + Dsui_0117 0.83 +0.2 116,339 - Dsui_0117 0.83 +0.2 116,379 + Dsui_0117 0.86 -0.8 116,379 + Dsui_0117 0.86 -0.8 116,379 + Dsui_0117 0.86 +0.2 116,387 - Dsui_0117 0.86 -1.3 116,387 - Dsui_0117 0.86 -0.4 116,509 + -1.1 116,509 + -3.1 116,592 + +0.2 116,592 + +0.2 116,759 - +0.1 116,759 - +0.1 116,762 + -0.8 116,762 + +0.2 116,769 - -0.2 116,775 - +0.2 116,870 + Dsui_0118 0.33 -1.4 116,922 - Dsui_0118 0.49 +0.3 116,939 + Dsui_0118 0.55 -0.8 116,957 - Dsui_0118 0.60 +0.4 116,970 - Dsui_0118 0.64 +0.5 116,974 - Dsui_0118 0.65 +0.3 117,036 - Dsui_0118 0.85 +0.6 117,069 + +0.2 117,094 - +0.6 117,931 - -0.2 117,939 + -1.4
Or see this region's nucleotide sequence