Experiment: L-Methionine as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1995 and DvMF_1996 are separated by 303 nucleotides DvMF_1996 and DvMF_1997 are separated by 350 nucleotides
DvMF_1995: DvMF_1995 - Malate/L-lactate dehydrogenase (RefSeq), at 2,472,315 to 2,473,385
_1995
DvMF_1996: DvMF_1996 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,473,689 to 2,475,722
_1996
DvMF_1997: DvMF_1997 - hypothetical protein (RefSeq), at 2,476,073 to 2,477,323
_1997
Position (kb)
2473
2474
2475
2476 Strain fitness (log2 ratio)
-1
0
1 at 2472.799 kb on + strand, within DvMF_1995 at 2472.822 kb on - strand, within DvMF_1995 at 2473.094 kb on + strand, within DvMF_1995 at 2473.263 kb on + strand, within DvMF_1995 at 2473.263 kb on - strand, within DvMF_1995 at 2473.374 kb on - strand at 2473.531 kb on - strand at 2473.609 kb on + strand at 2473.617 kb on - strand at 2473.870 kb on + strand at 2474.292 kb on + strand, within DvMF_1996 at 2474.380 kb on - strand, within DvMF_1996 at 2474.702 kb on - strand, within DvMF_1996 at 2474.820 kb on + strand, within DvMF_1996 at 2474.853 kb on + strand, within DvMF_1996 at 2475.195 kb on + strand, within DvMF_1996 at 2475.728 kb on - strand at 2475.751 kb on + strand at 2475.761 kb on - strand at 2475.906 kb on + strand at 2475.909 kb on - strand at 2475.914 kb on - strand at 2476.143 kb on + strand at 2476.351 kb on + strand, within DvMF_1997 at 2476.423 kb on + strand, within DvMF_1997 at 2476.428 kb on + strand, within DvMF_1997 at 2476.433 kb on + strand, within DvMF_1997 at 2476.621 kb on - strand, within DvMF_1997 at 2476.683 kb on + strand, within DvMF_1997 at 2476.691 kb on - strand, within DvMF_1997
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine as nutrient remove 2,472,799 + DvMF_1995 0.45 -0.2 2,472,822 - DvMF_1995 0.47 +0.5 2,473,094 + DvMF_1995 0.73 -0.9 2,473,263 + DvMF_1995 0.89 -1.5 2,473,263 - DvMF_1995 0.89 -1.0 2,473,374 - +0.7 2,473,531 - +0.5 2,473,609 + +0.5 2,473,617 - +0.4 2,473,870 + -0.5 2,474,292 + DvMF_1996 0.30 +0.2 2,474,380 - DvMF_1996 0.34 +0.9 2,474,702 - DvMF_1996 0.50 -0.4 2,474,820 + DvMF_1996 0.56 -0.3 2,474,853 + DvMF_1996 0.57 +0.1 2,475,195 + DvMF_1996 0.74 +0.1 2,475,728 - +0.5 2,475,751 + +0.7 2,475,761 - +1.0 2,475,906 + -0.3 2,475,909 - +0.3 2,475,914 - +0.9 2,476,143 + +0.6 2,476,351 + DvMF_1997 0.22 +0.3 2,476,423 + DvMF_1997 0.28 +0.4 2,476,428 + DvMF_1997 0.28 +0.6 2,476,433 + DvMF_1997 0.29 +1.6 2,476,621 - DvMF_1997 0.44 +0.1 2,476,683 + DvMF_1997 0.49 +0.7 2,476,691 - DvMF_1997 0.49 +0.2
Or see this region's nucleotide sequence