Experiment: L-Methionine as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1837 and DvMF_1838 overlap by 8 nucleotides DvMF_1838 and DvMF_1839 are separated by 57 nucleotides
DvMF_1837: DvMF_1837 - glycosyl transferase family 2 (RefSeq), at 2,246,324 to 2,247,376
_1837
DvMF_1838: DvMF_1838 - Radical SAM domain protein (RefSeq), at 2,247,369 to 2,248,844
_1838
DvMF_1839: DvMF_1839 - Methyltransferase type 11 (RefSeq), at 2,248,902 to 2,250,038
_1839
Position (kb)
2247
2248
2249 Strain fitness (log2 ratio)
-1
0
1 at 2246.381 kb on - strand at 2246.388 kb on + strand at 2246.445 kb on + strand, within DvMF_1837 at 2246.687 kb on - strand, within DvMF_1837 at 2247.278 kb on + strand at 2247.311 kb on + strand at 2247.652 kb on - strand, within DvMF_1838 at 2247.667 kb on + strand, within DvMF_1838 at 2247.779 kb on + strand, within DvMF_1838 at 2247.804 kb on - strand, within DvMF_1838 at 2247.825 kb on - strand, within DvMF_1838 at 2247.863 kb on + strand, within DvMF_1838 at 2247.871 kb on - strand, within DvMF_1838 at 2247.916 kb on - strand, within DvMF_1838 at 2248.023 kb on + strand, within DvMF_1838 at 2248.144 kb on + strand, within DvMF_1838 at 2248.152 kb on - strand, within DvMF_1838 at 2248.157 kb on - strand, within DvMF_1838 at 2248.235 kb on - strand, within DvMF_1838 at 2248.274 kb on + strand, within DvMF_1838 at 2248.302 kb on + strand, within DvMF_1838 at 2248.341 kb on + strand, within DvMF_1838 at 2248.421 kb on - strand, within DvMF_1838 at 2248.436 kb on - strand, within DvMF_1838 at 2248.728 kb on - strand at 2248.834 kb on + strand at 2248.841 kb on - strand at 2249.217 kb on - strand, within DvMF_1839 at 2249.398 kb on - strand, within DvMF_1839 at 2249.484 kb on + strand, within DvMF_1839 at 2249.484 kb on + strand, within DvMF_1839 at 2249.492 kb on - strand, within DvMF_1839 at 2249.492 kb on - strand, within DvMF_1839 at 2249.750 kb on + strand, within DvMF_1839 at 2249.816 kb on + strand, within DvMF_1839 at 2249.818 kb on - strand, within DvMF_1839 at 2249.828 kb on - strand, within DvMF_1839
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine as nutrient remove 2,246,381 - -0.0 2,246,388 + +1.2 2,246,445 + DvMF_1837 0.11 -0.3 2,246,687 - DvMF_1837 0.34 -1.0 2,247,278 + +0.2 2,247,311 + +0.5 2,247,652 - DvMF_1838 0.19 +0.2 2,247,667 + DvMF_1838 0.20 +0.4 2,247,779 + DvMF_1838 0.28 +0.4 2,247,804 - DvMF_1838 0.29 +0.5 2,247,825 - DvMF_1838 0.31 +0.6 2,247,863 + DvMF_1838 0.33 -0.1 2,247,871 - DvMF_1838 0.34 +0.9 2,247,916 - DvMF_1838 0.37 +0.2 2,248,023 + DvMF_1838 0.44 +0.5 2,248,144 + DvMF_1838 0.53 +0.4 2,248,152 - DvMF_1838 0.53 +0.3 2,248,157 - DvMF_1838 0.53 +0.8 2,248,235 - DvMF_1838 0.59 -0.1 2,248,274 + DvMF_1838 0.61 +0.2 2,248,302 + DvMF_1838 0.63 -0.2 2,248,341 + DvMF_1838 0.66 +0.2 2,248,421 - DvMF_1838 0.71 -0.1 2,248,436 - DvMF_1838 0.72 +0.8 2,248,728 - -1.0 2,248,834 + -0.1 2,248,841 - +0.3 2,249,217 - DvMF_1839 0.28 +0.6 2,249,398 - DvMF_1839 0.44 +0.5 2,249,484 + DvMF_1839 0.51 +0.4 2,249,484 + DvMF_1839 0.51 +0.6 2,249,492 - DvMF_1839 0.52 +0.4 2,249,492 - DvMF_1839 0.52 +0.4 2,249,750 + DvMF_1839 0.75 +0.5 2,249,816 + DvMF_1839 0.80 +1.3 2,249,818 - DvMF_1839 0.81 +1.1 2,249,828 - DvMF_1839 0.81 +0.7
Or see this region's nucleotide sequence