Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3495

Experiment: m.b. Vancomycin 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.064 mg/ml
3,675,980	+		Dshi_3493	0.49	-0.2
3,676,074	-		Dshi_3493	0.61	-0.9
3,676,174	-		Dshi_3493	0.74	+0.5
3,676,177	+		Dshi_3493	0.74	+0.1
3,676,224	+		Dshi_3493	0.80	+0.2
3,676,233	-		Dshi_3493	0.81	+1.2
3,676,328	+				-0.0
3,676,328	+				-0.7
3,676,328	+				+0.5
3,676,328	+				+0.9
3,676,336	-				+0.2
3,676,336	-				+1.4
3,676,436	+				-0.6
3,676,458	-				+0.2
3,676,468	-				+0.7
3,676,488	-				+0.4
3,676,493	+				+0.9
3,676,493	+				+0.0
3,676,493	+				+0.5
3,676,501	-				+0.6
3,676,501	-				+0.9
3,676,501	-				+1.4
3,676,506	-		Dshi_3494	0.10	+1.6
3,676,543	-		Dshi_3494	0.17	+0.0
3,676,574	-		Dshi_3494	0.24	+0.7
3,676,610	-		Dshi_3494	0.31	+0.6
3,676,630	+		Dshi_3494	0.35	+0.3
3,676,662	+		Dshi_3494	0.41	-1.2
3,676,700	+		Dshi_3494	0.49	+1.4
3,676,705	+		Dshi_3494	0.50	+0.7
3,676,708	-				-0.1
3,676,735	-		Dshi_3494	0.56	-0.3
3,676,757	-		Dshi_3494	0.60	-0.5
3,676,800	-		Dshi_3494	0.69	-2.0
3,676,959	+				-0.4
3,676,995	+				-0.7
3,677,549	+				-0.3
3,677,550	+				+0.6
3,677,558	-				+0.3
3,677,570	-				-1.3
3,677,574	+				-0.9
3,677,577	-				-0.9
3,677,639	+				-1.9
3,677,647	-				-0.2
3,677,649	-				+0.2
3,677,649	-				-0.7
3,677,650	-				+0.7
3,677,652	+				-2.5
3,677,659	-				+0.3
3,677,669	-				+1.6
3,677,676	+				-0.8
3,677,682	-				-0.2
3,677,689	-				+0.9
3,677,689	-				-1.0
3,677,728	-		Dshi_3496	0.11	-0.8
3,677,847	-		Dshi_3496	0.31	-1.3
3,677,865	+		Dshi_3496	0.34	+0.3
3,677,925	+		Dshi_3496	0.44	-0.5
3,677,940	-		Dshi_3496	0.46	-0.6
3,677,959	-		Dshi_3496	0.50	-0.1
3,677,959	-		Dshi_3496	0.50	-0.7
3,677,963	+		Dshi_3496	0.50	-0.3
3,677,968	+		Dshi_3496	0.51	-0.7
3,677,976	-		Dshi_3496	0.52	-1.3
3,678,009	-		Dshi_3496	0.58	+0.2
3,678,043	-		Dshi_3496	0.64	-0.9
3,678,073	+		Dshi_3496	0.68	+0.6
3,678,086	-		Dshi_3496	0.71	-0.7
3,678,123	-		Dshi_3496	0.77	-0.4
3,678,210	+				-0.4
3,678,225	-				-1.0
3,678,229	+				-1.2
3,678,237	-				-0.8
3,678,251	+				+0.9
3,678,251	-				-1.2
3,678,261	+				+0.2
3,678,264	-				-0.6
3,678,430	-				-1.8
3,678,432	+				-1.0
3,678,453	+				-0.5
3,678,461	-				-2.2
3,678,461	-				-1.0
3,678,461	-				-1.0
3,678,471	+				+0.7