Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06125 and H281DRAFT_06126 are separated by 248 nucleotides H281DRAFT_06126 and H281DRAFT_06127 are separated by 435 nucleotides H281DRAFT_06127 and H281DRAFT_06128 are separated by 16 nucleotides
H281DRAFT_06125: H281DRAFT_06125 - hypothetical protein, at 5,245 to 10,137
_06125
H281DRAFT_06126: H281DRAFT_06126 - hypothetical protein, at 10,386 to 10,634
_06126
H281DRAFT_06127: H281DRAFT_06127 - hypothetical protein, at 11,070 to 13,796
_06127
H281DRAFT_06128: H281DRAFT_06128 - hypothetical protein, at 13,813 to 15,111
_06128
Position (kb) 11
12
13
14 Strain fitness (log2 ratio) -2
-1
0
1 at 10.087 kb on + strand at 10.087 kb on + strand at 10.087 kb on + strand at 10.088 kb on - strand at 10.088 kb on - strand at 10.088 kb on - strand at 10.165 kb on - strand at 10.165 kb on - strand at 10.207 kb on - strand at 10.207 kb on - strand at 10.210 kb on + strand at 10.210 kb on + strand at 10.211 kb on - strand at 10.211 kb on - strand at 10.211 kb on - strand at 10.211 kb on - strand at 10.213 kb on + strand at 10.213 kb on + strand at 10.214 kb on - strand at 10.214 kb on - strand at 10.214 kb on - strand at 10.232 kb on + strand at 10.232 kb on + strand at 10.233 kb on - strand at 10.236 kb on + strand at 10.236 kb on + strand at 10.237 kb on - strand at 10.288 kb on + strand at 10.289 kb on - strand at 10.289 kb on - strand at 10.289 kb on - strand at 10.390 kb on - strand at 10.390 kb on - strand at 10.390 kb on - strand at 10.428 kb on - strand, within H281DRAFT_06126 at 10.457 kb on - strand, within H281DRAFT_06126 at 10.464 kb on + strand, within H281DRAFT_06126 at 10.464 kb on + strand, within H281DRAFT_06126 at 10.586 kb on - strand, within H281DRAFT_06126 at 10.586 kb on - strand, within H281DRAFT_06126 at 10.586 kb on - strand, within H281DRAFT_06126 at 10.586 kb on - strand, within H281DRAFT_06126 at 10.586 kb on - strand, within H281DRAFT_06126 at 10.653 kb on + strand at 10.654 kb on - strand at 10.654 kb on - strand at 10.654 kb on - strand at 10.654 kb on - strand at 10.659 kb on + strand at 10.659 kb on + strand at 10.659 kb on + strand at 10.691 kb on + strand at 10.691 kb on + strand at 10.691 kb on + strand at 10.691 kb on + strand at 10.692 kb on - strand at 10.765 kb on + strand at 10.765 kb on + strand at 10.766 kb on - strand at 10.776 kb on + strand at 10.776 kb on + strand at 10.777 kb on - strand at 10.808 kb on + strand at 10.809 kb on - strand at 10.809 kb on - strand at 10.889 kb on + strand at 10.903 kb on + strand at 10.904 kb on - strand at 10.905 kb on + strand at 10.905 kb on + strand at 10.905 kb on + strand at 10.906 kb on - strand at 10.924 kb on + strand at 10.924 kb on + strand at 10.925 kb on - strand at 10.925 kb on - strand at 10.945 kb on - strand at 10.948 kb on + strand at 10.948 kb on + strand at 10.949 kb on - strand at 11.028 kb on + strand at 11.029 kb on - strand at 11.030 kb on + strand at 11.031 kb on - strand at 11.031 kb on - strand at 11.034 kb on + strand at 11.035 kb on - strand at 11.040 kb on - strand at 11.071 kb on + strand at 11.335 kb on + strand at 11.658 kb on + strand, within H281DRAFT_06127 at 12.624 kb on + strand, within H281DRAFT_06127 at 12.657 kb on + strand, within H281DRAFT_06127 at 12.657 kb on + strand, within H281DRAFT_06127 at 12.663 kb on + strand at 12.866 kb on + strand, within H281DRAFT_06127 at 12.929 kb on + strand, within H281DRAFT_06127 at 13.278 kb on + strand, within H281DRAFT_06127 at 13.379 kb on + strand, within H281DRAFT_06127 at 13.380 kb on - strand, within H281DRAFT_06127 at 13.380 kb on - strand, within H281DRAFT_06127 at 13.381 kb on + strand, within H281DRAFT_06127 at 13.381 kb on + strand, within H281DRAFT_06127 at 13.423 kb on + strand, within H281DRAFT_06127 at 13.541 kb on - strand at 13.541 kb on - strand at 13.553 kb on - strand at 13.556 kb on + strand at 13.556 kb on + strand at 13.556 kb on + strand at 13.557 kb on - strand at 13.814 kb on + strand at 13.814 kb on + strand at 13.815 kb on - strand at 13.815 kb on - strand at 13.815 kb on - strand at 13.815 kb on - strand at 13.872 kb on + strand at 13.922 kb on - strand at 13.947 kb on + strand at 13.984 kb on + strand, within H281DRAFT_06128 at 13.984 kb on + strand, within H281DRAFT_06128 at 13.984 kb on + strand, within H281DRAFT_06128 at 13.984 kb on + strand, within H281DRAFT_06128 at 13.984 kb on + strand, within H281DRAFT_06128 at 13.985 kb on - strand, within H281DRAFT_06128 at 13.985 kb on - strand, within H281DRAFT_06128 at 13.985 kb on - strand, within H281DRAFT_06128 at 13.985 kb on - strand, within H281DRAFT_06128 at 13.985 kb on - strand, within H281DRAFT_06128 at 14.026 kb on + strand, within H281DRAFT_06128 at 14.027 kb on - strand, within H281DRAFT_06128 at 14.207 kb on - strand, within H281DRAFT_06128 at 14.207 kb on - strand, within H281DRAFT_06128 at 14.219 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.328 kb on + strand, within H281DRAFT_06128 at 14.329 kb on - strand, within H281DRAFT_06128 at 14.329 kb on - strand, within H281DRAFT_06128 at 14.332 kb on + strand, within H281DRAFT_06128 at 14.332 kb on + strand, within H281DRAFT_06128 at 14.332 kb on + strand, within H281DRAFT_06128 at 14.332 kb on + strand, within H281DRAFT_06128 at 14.332 kb on + strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.333 kb on - strand, within H281DRAFT_06128 at 14.489 kb on + strand, within H281DRAFT_06128 at 14.489 kb on + strand, within H281DRAFT_06128 at 14.489 kb on + strand, within H281DRAFT_06128 at 14.489 kb on + strand, within H281DRAFT_06128 at 14.489 kb on + strand, within H281DRAFT_06128 at 14.490 kb on - strand, within H281DRAFT_06128 at 14.490 kb on - strand, within H281DRAFT_06128 at 14.490 kb on - strand, within H281DRAFT_06128 at 14.490 kb on - strand, within H281DRAFT_06128 at 14.490 kb on - strand, within H281DRAFT_06128 at 14.544 kb on + strand, within H281DRAFT_06128 at 14.545 kb on - strand, within H281DRAFT_06128 at 14.545 kb on - strand, within H281DRAFT_06128 at 14.545 kb on - strand, within H281DRAFT_06128 at 14.567 kb on + strand, within H281DRAFT_06128 at 14.717 kb on - strand, within H281DRAFT_06128 at 14.743 kb on + strand, within H281DRAFT_06128 at 14.743 kb on + strand at 14.744 kb on - strand, within H281DRAFT_06128
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 10,087 + +0.1 10,087 + -0.4 10,087 + +0.2 10,088 - +0.6 10,088 - -0.8 10,088 - +0.7 10,165 - +0.6 10,165 - +1.5 10,207 - -1.6 10,207 - +0.3 10,210 + +0.2 10,210 + +0.1 10,211 - -0.3 10,211 - -0.0 10,211 - +0.7 10,211 - -0.3 10,213 + -0.6 10,213 + +0.2 10,214 - +0.4 10,214 - -0.1 10,214 - -0.1 10,232 + +0.6 10,232 + +0.9 10,233 - +0.1 10,236 + +0.1 10,236 + -0.2 10,237 - +0.4 10,288 + +0.1 10,289 - +0.8 10,289 - +0.0 10,289 - -0.2 10,390 - +0.6 10,390 - -0.0 10,390 - -0.2 10,428 - H281DRAFT_06126 0.17 -0.0 10,457 - H281DRAFT_06126 0.29 -0.1 10,464 + H281DRAFT_06126 0.31 -1.1 10,464 + H281DRAFT_06126 0.31 -0.3 10,586 - H281DRAFT_06126 0.80 +0.1 10,586 - H281DRAFT_06126 0.80 -0.3 10,586 - H281DRAFT_06126 0.80 +0.6 10,586 - H281DRAFT_06126 0.80 +0.9 10,586 - H281DRAFT_06126 0.80 +0.3 10,653 + +0.1 10,654 - +0.6 10,654 - -1.2 10,654 - -0.7 10,654 - -0.5 10,659 + +1.3 10,659 + -0.9 10,659 + +0.7 10,691 + +0.3 10,691 + -0.5 10,691 + +0.0 10,691 + +0.1 10,692 - +0.5 10,765 + +0.0 10,765 + -0.0 10,766 - +0.2 10,776 + -0.3 10,776 + +0.4 10,777 - -0.1 10,808 + -0.0 10,809 - +0.5 10,809 - +0.8 10,889 + -0.3 10,903 + +1.3 10,904 - -1.2 10,905 + -0.6 10,905 + -0.4 10,905 + -0.4 10,906 - -0.1 10,924 + +0.3 10,924 + -0.1 10,925 - -0.2 10,925 - -0.6 10,945 - +0.6 10,948 + +0.0 10,948 + +1.5 10,949 - +0.4 11,028 + +0.1 11,029 - +0.1 11,030 + -0.2 11,031 - +0.3 11,031 - +0.3 11,034 + -0.4 11,035 - -0.6 11,040 - -0.4 11,071 + +0.0 11,335 + -1.2 11,658 + H281DRAFT_06127 0.22 -1.0 12,624 + H281DRAFT_06127 0.57 +0.7 12,657 + H281DRAFT_06127 0.58 -0.4 12,657 + H281DRAFT_06127 0.58 -0.3 12,663 + -0.6 12,866 + H281DRAFT_06127 0.66 -0.7 12,929 + H281DRAFT_06127 0.68 -1.3 13,278 + H281DRAFT_06127 0.81 -0.9 13,379 + H281DRAFT_06127 0.85 -0.8 13,380 - H281DRAFT_06127 0.85 +1.2 13,380 - H281DRAFT_06127 0.85 -0.3 13,381 + H281DRAFT_06127 0.85 -1.0 13,381 + H281DRAFT_06127 0.85 -1.4 13,423 + H281DRAFT_06127 0.86 -1.5 13,541 - -1.8 13,541 - -1.4 13,553 - +0.1 13,556 + -0.1 13,556 + -0.3 13,556 + -0.2 13,557 - -0.1 13,814 + -0.1 13,814 + -0.2 13,815 - +0.3 13,815 - +0.2 13,815 - -0.1 13,815 - +1.3 13,872 + -0.5 13,922 - -0.4 13,947 + -0.9 13,984 + H281DRAFT_06128 0.13 +0.3 13,984 + H281DRAFT_06128 0.13 +0.1 13,984 + H281DRAFT_06128 0.13 +0.5 13,984 + H281DRAFT_06128 0.13 -0.3 13,984 + H281DRAFT_06128 0.13 +0.1 13,985 - H281DRAFT_06128 0.13 -0.1 13,985 - H281DRAFT_06128 0.13 +0.8 13,985 - H281DRAFT_06128 0.13 -0.2 13,985 - H281DRAFT_06128 0.13 -0.3 13,985 - H281DRAFT_06128 0.13 +0.0 14,026 + H281DRAFT_06128 0.16 +0.4 14,027 - H281DRAFT_06128 0.16 -0.0 14,207 - H281DRAFT_06128 0.30 +0.8 14,207 - H281DRAFT_06128 0.30 +0.1 14,219 + H281DRAFT_06128 0.31 +0.8 14,328 + H281DRAFT_06128 0.40 +0.5 14,328 + H281DRAFT_06128 0.40 -1.1 14,328 + H281DRAFT_06128 0.40 +0.3 14,328 + H281DRAFT_06128 0.40 -0.2 14,328 + H281DRAFT_06128 0.40 -1.0 14,328 + H281DRAFT_06128 0.40 +0.2 14,328 + H281DRAFT_06128 0.40 +0.6 14,329 - H281DRAFT_06128 0.40 +0.3 14,329 - H281DRAFT_06128 0.40 -0.2 14,332 + H281DRAFT_06128 0.40 +0.1 14,332 + H281DRAFT_06128 0.40 -0.6 14,332 + H281DRAFT_06128 0.40 +0.5 14,332 + H281DRAFT_06128 0.40 +0.4 14,332 + H281DRAFT_06128 0.40 +0.1 14,333 - H281DRAFT_06128 0.40 -0.2 14,333 - H281DRAFT_06128 0.40 -0.0 14,333 - H281DRAFT_06128 0.40 +0.3 14,333 - H281DRAFT_06128 0.40 +0.1 14,333 - H281DRAFT_06128 0.40 -0.1 14,333 - H281DRAFT_06128 0.40 +0.2 14,489 + H281DRAFT_06128 0.52 -0.7 14,489 + H281DRAFT_06128 0.52 -0.0 14,489 + H281DRAFT_06128 0.52 +0.5 14,489 + H281DRAFT_06128 0.52 -0.4 14,489 + H281DRAFT_06128 0.52 +0.5 14,490 - H281DRAFT_06128 0.52 +0.2 14,490 - H281DRAFT_06128 0.52 -0.2 14,490 - H281DRAFT_06128 0.52 +0.3 14,490 - H281DRAFT_06128 0.52 +0.0 14,490 - H281DRAFT_06128 0.52 +0.5 14,544 + H281DRAFT_06128 0.56 +1.0 14,545 - H281DRAFT_06128 0.56 +0.1 14,545 - H281DRAFT_06128 0.56 +0.4 14,545 - H281DRAFT_06128 0.56 -0.4 14,567 + H281DRAFT_06128 0.58 +0.0 14,717 - H281DRAFT_06128 0.70 +0.6 14,743 + H281DRAFT_06128 0.72 -0.2 14,743 + +1.2 14,744 - H281DRAFT_06128 0.72 +0.1
Or see this region's nucleotide sequence