Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06010 and H281DRAFT_06011 are separated by 234 nucleotides H281DRAFT_06011 and H281DRAFT_06012 are separated by 68 nucleotides H281DRAFT_06012 and H281DRAFT_06013 are separated by 112 nucleotides
H281DRAFT_06010: H281DRAFT_06010 - hypothetical protein, at 13,441 to 13,887
_06010
H281DRAFT_06011: H281DRAFT_06011 - SSU ribosomal protein S21P, at 14,122 to 14,334
_06011
H281DRAFT_06012: H281DRAFT_06012 - hypothetical protein, at 14,403 to 15,620
_06012
H281DRAFT_06013: H281DRAFT_06013 - O-sialoglycoprotein endopeptidase, at 15,733 to 16,761
_06013
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.858 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 14.223 kb on - strand, within H281DRAFT_06011 at 14.370 kb on - strand at 14.372 kb on - strand at 14.419 kb on + strand at 14.420 kb on - strand at 14.420 kb on - strand at 14.420 kb on - strand at 14.476 kb on + strand at 14.496 kb on + strand at 14.521 kb on + strand at 14.522 kb on - strand at 14.808 kb on + strand, within H281DRAFT_06012 at 14.809 kb on - strand, within H281DRAFT_06012 at 14.809 kb on - strand, within H281DRAFT_06012 at 14.872 kb on + strand, within H281DRAFT_06012 at 15.098 kb on - strand, within H281DRAFT_06012 at 15.098 kb on - strand, within H281DRAFT_06012 at 15.329 kb on + strand, within H281DRAFT_06012 at 15.329 kb on + strand, within H281DRAFT_06012 at 15.330 kb on - strand, within H281DRAFT_06012 at 15.330 kb on - strand, within H281DRAFT_06012 at 15.390 kb on - strand, within H281DRAFT_06012 at 15.390 kb on - strand, within H281DRAFT_06012 at 15.390 kb on - strand, within H281DRAFT_06012 at 15.390 kb on - strand at 15.390 kb on - strand, within H281DRAFT_06012 at 15.436 kb on + strand, within H281DRAFT_06012 at 15.436 kb on + strand, within H281DRAFT_06012 at 15.437 kb on - strand at 15.437 kb on - strand, within H281DRAFT_06012 at 15.437 kb on - strand, within H281DRAFT_06012 at 15.454 kb on + strand, within H281DRAFT_06012 at 15.454 kb on + strand, within H281DRAFT_06012 at 15.455 kb on - strand, within H281DRAFT_06012 at 15.455 kb on - strand, within H281DRAFT_06012 at 15.605 kb on + strand at 15.606 kb on - strand at 15.633 kb on + strand at 15.633 kb on + strand at 15.634 kb on - strand at 15.675 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 13,623 - H281DRAFT_06010 0.41 +0.6 13,623 - H281DRAFT_06010 0.41 +0.8 13,623 - H281DRAFT_06010 0.41 -0.1 13,623 - H281DRAFT_06010 0.41 +0.6 13,858 - +0.3 13,889 - +0.5 13,889 - +0.6 13,889 - -0.3 14,223 - H281DRAFT_06011 0.47 -0.9 14,370 - +0.7 14,372 - -0.1 14,419 + +0.1 14,420 - +0.2 14,420 - -1.2 14,420 - +0.4 14,476 + -0.4 14,496 + -0.7 14,521 + +0.6 14,522 - +0.6 14,808 + H281DRAFT_06012 0.33 +0.2 14,809 - H281DRAFT_06012 0.33 +0.4 14,809 - H281DRAFT_06012 0.33 -0.5 14,872 + H281DRAFT_06012 0.39 -0.2 15,098 - H281DRAFT_06012 0.57 +0.8 15,098 - H281DRAFT_06012 0.57 -0.4 15,329 + H281DRAFT_06012 0.76 -0.2 15,329 + H281DRAFT_06012 0.76 +0.5 15,330 - H281DRAFT_06012 0.76 +0.8 15,330 - H281DRAFT_06012 0.76 -0.3 15,390 - H281DRAFT_06012 0.81 +0.1 15,390 - H281DRAFT_06012 0.81 +0.1 15,390 - H281DRAFT_06012 0.81 +1.6 15,390 - +0.4 15,390 - H281DRAFT_06012 0.81 -0.2 15,436 + H281DRAFT_06012 0.85 +0.0 15,436 + H281DRAFT_06012 0.85 -0.5 15,437 - +1.1 15,437 - H281DRAFT_06012 0.85 +0.6 15,437 - H281DRAFT_06012 0.85 -0.5 15,454 + H281DRAFT_06012 0.86 +0.7 15,454 + H281DRAFT_06012 0.86 -0.3 15,455 - H281DRAFT_06012 0.86 -0.8 15,455 - H281DRAFT_06012 0.86 -1.5 15,605 + -0.6 15,606 - +0.8 15,633 + -0.2 15,633 + -0.0 15,634 - -0.2 15,675 + +0.4
Or see this region's nucleotide sequence