Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05652 and H281DRAFT_05653 are separated by 75 nucleotides H281DRAFT_05653 and H281DRAFT_05654 overlap by 4 nucleotides
H281DRAFT_05652: H281DRAFT_05652 - histidinol dehydrogenase, at 73,959 to 75,281
_05652
H281DRAFT_05653: H281DRAFT_05653 - hypothetical protein, at 75,357 to 75,602
_05653
H281DRAFT_05654: H281DRAFT_05654 - histidinol phosphate aminotransferase apoenzyme, at 75,599 to 76,669
_05654
Position (kb) 75
76 Strain fitness (log2 ratio) -1
0
1 at 75.272 kb on + strand at 75.406 kb on + strand, within H281DRAFT_05653 at 75.483 kb on + strand, within H281DRAFT_05653 at 75.598 kb on + strand at 75.598 kb on + strand at 75.598 kb on + strand at 75.599 kb on - strand at 75.599 kb on - strand at 75.599 kb on - strand at 75.651 kb on - strand at 75.799 kb on - strand, within H281DRAFT_05654 at 75.817 kb on - strand, within H281DRAFT_05654 at 75.877 kb on + strand, within H281DRAFT_05654 at 75.877 kb on + strand, within H281DRAFT_05654 at 75.877 kb on + strand, within H281DRAFT_05654 at 75.878 kb on - strand, within H281DRAFT_05654 at 75.944 kb on + strand, within H281DRAFT_05654 at 75.944 kb on + strand, within H281DRAFT_05654 at 75.944 kb on + strand, within H281DRAFT_05654 at 75.944 kb on + strand, within H281DRAFT_05654 at 75.945 kb on - strand, within H281DRAFT_05654 at 75.945 kb on - strand, within H281DRAFT_05654 at 76.065 kb on - strand, within H281DRAFT_05654 at 76.169 kb on + strand, within H281DRAFT_05654 at 76.278 kb on - strand, within H281DRAFT_05654 at 76.331 kb on + strand, within H281DRAFT_05654 at 76.487 kb on - strand, within H281DRAFT_05654 at 76.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 75,272 + +0.3 75,406 + H281DRAFT_05653 0.20 +1.4 75,483 + H281DRAFT_05653 0.51 +0.6 75,598 + +0.4 75,598 + +0.1 75,598 + +0.1 75,599 - +0.1 75,599 - +0.3 75,599 - -0.2 75,651 - +0.9 75,799 - H281DRAFT_05654 0.19 +0.3 75,817 - H281DRAFT_05654 0.20 +0.0 75,877 + H281DRAFT_05654 0.26 +1.0 75,877 + H281DRAFT_05654 0.26 -0.0 75,877 + H281DRAFT_05654 0.26 +0.2 75,878 - H281DRAFT_05654 0.26 +0.4 75,944 + H281DRAFT_05654 0.32 -0.2 75,944 + H281DRAFT_05654 0.32 +0.4 75,944 + H281DRAFT_05654 0.32 +0.6 75,944 + H281DRAFT_05654 0.32 +0.1 75,945 - H281DRAFT_05654 0.32 -0.2 75,945 - H281DRAFT_05654 0.32 +0.8 76,065 - H281DRAFT_05654 0.44 +0.6 76,169 + H281DRAFT_05654 0.53 -0.3 76,278 - H281DRAFT_05654 0.63 -1.3 76,331 + H281DRAFT_05654 0.68 +0.0 76,487 - H281DRAFT_05654 0.83 +0.6 76,571 - -0.5
Or see this region's nucleotide sequence