Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04776 and H281DRAFT_04777 are separated by 5 nucleotides H281DRAFT_04777 and H281DRAFT_04778 are separated by 25 nucleotides H281DRAFT_04778 and H281DRAFT_04779 are separated by 63 nucleotides
H281DRAFT_04776: H281DRAFT_04776 - GDPmannose 4,6-dehydratase, at 197,526 to 198,644
_04776
H281DRAFT_04777: H281DRAFT_04777 - GDP-L-fucose synthase, at 198,650 to 199,606
_04777
H281DRAFT_04778: H281DRAFT_04778 - Glycosyltransferase involved in cell wall bisynthesis, at 199,632 to 200,774
_04778
H281DRAFT_04779: H281DRAFT_04779 - colanic acid biosynthesis glycosyl transferase WcaI, at 200,838 to 202,169
_04779
Position (kb) 199
200
201 Strain fitness (log2 ratio) -1
0
1 at 198.736 kb on + strand at 198.737 kb on - strand at 198.737 kb on - strand at 198.894 kb on - strand, within H281DRAFT_04777 at 198.984 kb on - strand, within H281DRAFT_04777 at 199.112 kb on + strand, within H281DRAFT_04777 at 199.169 kb on + strand, within H281DRAFT_04777 at 199.574 kb on - strand at 199.800 kb on + strand, within H281DRAFT_04778 at 199.801 kb on - strand, within H281DRAFT_04778 at 199.942 kb on - strand, within H281DRAFT_04778 at 200.455 kb on - strand, within H281DRAFT_04778 at 200.701 kb on + strand at 200.701 kb on + strand at 200.702 kb on - strand at 200.816 kb on + strand at 200.817 kb on - strand at 201.166 kb on + strand, within H281DRAFT_04779 at 201.258 kb on + strand, within H281DRAFT_04779 at 201.259 kb on - strand, within H281DRAFT_04779
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 198,736 + -0.1 198,737 - -0.0 198,737 - +0.6 198,894 - H281DRAFT_04777 0.25 -0.3 198,984 - H281DRAFT_04777 0.35 -0.6 199,112 + H281DRAFT_04777 0.48 -0.4 199,169 + H281DRAFT_04777 0.54 +0.6 199,574 - +1.2 199,800 + H281DRAFT_04778 0.15 +0.5 199,801 - H281DRAFT_04778 0.15 +0.1 199,942 - H281DRAFT_04778 0.27 +0.9 200,455 - H281DRAFT_04778 0.72 +0.4 200,701 + +0.3 200,701 + +0.2 200,702 - -1.2 200,816 + -0.3 200,817 - +0.1 201,166 + H281DRAFT_04779 0.25 +0.4 201,258 + H281DRAFT_04779 0.32 +0.1 201,259 - H281DRAFT_04779 0.32 +0.3
Or see this region's nucleotide sequence