Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04772 and H281DRAFT_04773 are separated by 52 nucleotides H281DRAFT_04773 and H281DRAFT_04774 are separated by 68 nucleotides
H281DRAFT_04772: H281DRAFT_04772 - mannose-6-phosphate isomerase, type 2, at 190,950 to 192,497
_04772
H281DRAFT_04773: H281DRAFT_04773 - Undecaprenyl-phosphate glucose phosphotransferase, at 192,550 to 193,935
_04773
H281DRAFT_04774: H281DRAFT_04774 - polysaccharide export outer membrane protein, at 194,004 to 195,143
_04774
Position (kb) 192
193
194 Strain fitness (log2 ratio) -2
-1
0
1
2 at 191.581 kb on - strand, within H281DRAFT_04772 at 191.778 kb on + strand, within H281DRAFT_04772 at 191.778 kb on + strand, within H281DRAFT_04772 at 191.991 kb on + strand, within H281DRAFT_04772 at 191.992 kb on - strand, within H281DRAFT_04772 at 192.725 kb on - strand, within H281DRAFT_04773 at 192.725 kb on - strand, within H281DRAFT_04773 at 192.818 kb on - strand, within H281DRAFT_04773 at 193.712 kb on - strand, within H281DRAFT_04773 at 193.846 kb on + strand at 193.846 kb on + strand at 193.846 kb on + strand at 193.847 kb on - strand at 193.930 kb on + strand at 193.930 kb on + strand at 193.933 kb on + strand at 193.934 kb on - strand at 194.422 kb on - strand, within H281DRAFT_04774 at 194.481 kb on - strand, within H281DRAFT_04774 at 194.557 kb on + strand, within H281DRAFT_04774 at 194.751 kb on + strand, within H281DRAFT_04774 at 194.752 kb on - strand, within H281DRAFT_04774 at 194.805 kb on + strand, within H281DRAFT_04774 at 194.806 kb on - strand, within H281DRAFT_04774 at 194.806 kb on - strand, within H281DRAFT_04774
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 191,581 - H281DRAFT_04772 0.41 -0.6 191,778 + H281DRAFT_04772 0.53 +0.4 191,778 + H281DRAFT_04772 0.53 -0.2 191,991 + H281DRAFT_04772 0.67 +1.3 191,992 - H281DRAFT_04772 0.67 -0.4 192,725 - H281DRAFT_04773 0.13 +0.4 192,725 - H281DRAFT_04773 0.13 +1.8 192,818 - H281DRAFT_04773 0.19 +1.4 193,712 - H281DRAFT_04773 0.84 +0.6 193,846 + -0.1 193,846 + -0.4 193,846 + -0.1 193,847 - +0.3 193,930 + -1.9 193,930 + -0.0 193,933 + -0.4 193,934 - +0.8 194,422 - H281DRAFT_04774 0.37 +0.8 194,481 - H281DRAFT_04774 0.42 +0.3 194,557 + H281DRAFT_04774 0.49 -0.2 194,751 + H281DRAFT_04774 0.66 +0.1 194,752 - H281DRAFT_04774 0.66 +0.3 194,805 + H281DRAFT_04774 0.70 -0.1 194,806 - H281DRAFT_04774 0.70 -0.4 194,806 - H281DRAFT_04774 0.70 +0.4
Or see this region's nucleotide sequence