Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04514 and H281DRAFT_04515 are separated by 99 nucleotides H281DRAFT_04515 and H281DRAFT_04516 are separated by 9 nucleotides H281DRAFT_04516 and H281DRAFT_04517 are separated by 191 nucleotides
H281DRAFT_04514: H281DRAFT_04514 - feruloyl esterase, at 245,513 to 247,168
_04514
H281DRAFT_04515: H281DRAFT_04515 - RNAse G, at 247,268 to 248,737
_04515
H281DRAFT_04516: H281DRAFT_04516 - septum formation protein, at 248,747 to 249,376
_04516
H281DRAFT_04517: H281DRAFT_04517 - 23S rRNA (pseudouridine1915-N3)-methyltransferase, at 249,568 to 250,038
_04517
Position (kb) 247
248
249 Strain fitness (log2 ratio) -1
0
1
2 at 246.439 kb on + strand, within H281DRAFT_04514 at 246.440 kb on - strand, within H281DRAFT_04514 at 246.440 kb on - strand, within H281DRAFT_04514 at 246.539 kb on + strand, within H281DRAFT_04514 at 246.671 kb on + strand, within H281DRAFT_04514 at 246.671 kb on + strand, within H281DRAFT_04514 at 246.671 kb on + strand, within H281DRAFT_04514 at 246.671 kb on + strand, within H281DRAFT_04514 at 246.730 kb on + strand, within H281DRAFT_04514 at 246.734 kb on + strand, within H281DRAFT_04514 at 246.876 kb on - strand, within H281DRAFT_04514 at 246.879 kb on - strand, within H281DRAFT_04514 at 246.936 kb on - strand, within H281DRAFT_04514 at 246.936 kb on - strand, within H281DRAFT_04514 at 246.936 kb on - strand, within H281DRAFT_04514 at 247.115 kb on + strand at 247.116 kb on - strand at 247.129 kb on + strand at 247.129 kb on + strand at 247.130 kb on - strand at 247.160 kb on - strand at 247.269 kb on + strand at 247.270 kb on - strand at 247.288 kb on - strand at 247.454 kb on + strand, within H281DRAFT_04515 at 247.454 kb on + strand, within H281DRAFT_04515 at 247.959 kb on + strand, within H281DRAFT_04515 at 248.110 kb on - strand, within H281DRAFT_04515 at 248.350 kb on - strand, within H281DRAFT_04515 at 248.817 kb on + strand, within H281DRAFT_04516 at 248.818 kb on - strand, within H281DRAFT_04516 at 248.903 kb on + strand, within H281DRAFT_04516 at 248.976 kb on - strand, within H281DRAFT_04516 at 248.997 kb on - strand at 249.112 kb on + strand, within H281DRAFT_04516 at 249.113 kb on - strand, within H281DRAFT_04516 at 249.204 kb on + strand, within H281DRAFT_04516 at 249.205 kb on - strand, within H281DRAFT_04516 at 249.400 kb on + strand at 249.400 kb on + strand at 249.473 kb on - strand at 249.570 kb on - strand at 249.570 kb on - strand at 249.640 kb on + strand, within H281DRAFT_04517 at 249.641 kb on - strand, within H281DRAFT_04517 at 249.641 kb on - strand, within H281DRAFT_04517 at 249.641 kb on - strand at 249.641 kb on - strand, within H281DRAFT_04517 at 249.641 kb on - strand, within H281DRAFT_04517 at 249.641 kb on - strand at 249.641 kb on - strand, within H281DRAFT_04517
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 246,439 + H281DRAFT_04514 0.56 +0.0 246,440 - H281DRAFT_04514 0.56 +0.1 246,440 - H281DRAFT_04514 0.56 -0.2 246,539 + H281DRAFT_04514 0.62 +0.3 246,671 + H281DRAFT_04514 0.70 +0.0 246,671 + H281DRAFT_04514 0.70 +0.0 246,671 + H281DRAFT_04514 0.70 +0.1 246,671 + H281DRAFT_04514 0.70 +0.0 246,730 + H281DRAFT_04514 0.73 +0.0 246,734 + H281DRAFT_04514 0.74 +0.1 246,876 - H281DRAFT_04514 0.82 +0.1 246,879 - H281DRAFT_04514 0.82 +0.6 246,936 - H281DRAFT_04514 0.86 +0.1 246,936 - H281DRAFT_04514 0.86 -0.1 246,936 - H281DRAFT_04514 0.86 +0.6 247,115 + +0.7 247,116 - +0.0 247,129 + +0.4 247,129 + +0.3 247,130 - -0.3 247,160 - +1.3 247,269 + +0.2 247,270 - -0.0 247,288 - +0.3 247,454 + H281DRAFT_04515 0.13 +0.1 247,454 + H281DRAFT_04515 0.13 +0.7 247,959 + H281DRAFT_04515 0.47 -1.1 248,110 - H281DRAFT_04515 0.57 -0.2 248,350 - H281DRAFT_04515 0.74 -0.9 248,817 + H281DRAFT_04516 0.11 -0.0 248,818 - H281DRAFT_04516 0.11 +0.9 248,903 + H281DRAFT_04516 0.25 +0.4 248,976 - H281DRAFT_04516 0.36 -0.1 248,997 - -0.1 249,112 + H281DRAFT_04516 0.58 +0.1 249,113 - H281DRAFT_04516 0.58 +0.3 249,204 + H281DRAFT_04516 0.73 -1.1 249,205 - H281DRAFT_04516 0.73 +1.8 249,400 + +0.7 249,400 + +0.2 249,473 - +0.6 249,570 - -0.4 249,570 - +0.1 249,640 + H281DRAFT_04517 0.15 +0.1 249,641 - H281DRAFT_04517 0.15 -0.3 249,641 - H281DRAFT_04517 0.15 +0.8 249,641 - +1.0 249,641 - H281DRAFT_04517 0.15 +1.3 249,641 - H281DRAFT_04517 0.15 -0.0 249,641 - +0.3 249,641 - H281DRAFT_04517 0.15 +0.3
Or see this region's nucleotide sequence