Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03802 and H281DRAFT_03803 are separated by 86 nucleotides H281DRAFT_03803 and H281DRAFT_03804 overlap by 4 nucleotides H281DRAFT_03804 and H281DRAFT_03805 are separated by 298 nucleotides
H281DRAFT_03802: H281DRAFT_03802 - two-component system, OmpR family, sensor histidine kinase TctE, at 322,812 to 324,206
_03802
H281DRAFT_03803: H281DRAFT_03803 - alcohol dehydrogenase, at 324,293 to 325,456
_03803
H281DRAFT_03804: H281DRAFT_03804 - Quinol monooxygenase YgiN, at 325,453 to 325,761
_03804
H281DRAFT_03805: H281DRAFT_03805 - Taurine dioxygenase, alpha-ketoglutarate-dependent, at 326,060 to 327,064
_03805
Position (kb)
324
325
326 Strain fitness (log2 ratio)
-1
0
1 at 323.559 kb on - strand, within H281DRAFT_03802 at 324.155 kb on + strand at 324.292 kb on - strand at 324.628 kb on - strand, within H281DRAFT_03803 at 324.628 kb on - strand, within H281DRAFT_03803 at 324.839 kb on - strand, within H281DRAFT_03803 at 324.839 kb on - strand, within H281DRAFT_03803 at 324.841 kb on - strand, within H281DRAFT_03803 at 325.007 kb on + strand, within H281DRAFT_03803 at 325.222 kb on + strand, within H281DRAFT_03803 at 325.415 kb on + strand at 325.415 kb on + strand at 325.584 kb on - strand, within H281DRAFT_03804 at 325.640 kb on + strand, within H281DRAFT_03804 at 325.727 kb on + strand, within H281DRAFT_03804 at 325.728 kb on - strand, within H281DRAFT_03804 at 325.748 kb on + strand at 325.748 kb on + strand at 325.765 kb on + strand at 325.765 kb on + strand at 325.765 kb on + strand at 325.830 kb on - strand at 325.835 kb on + strand at 325.867 kb on + strand at 325.889 kb on - strand at 325.938 kb on + strand at 325.939 kb on - strand at 325.939 kb on - strand at 326.060 kb on - strand at 326.060 kb on - strand at 326.349 kb on - strand, within H281DRAFT_03805 at 326.349 kb on - strand, within H281DRAFT_03805 at 326.392 kb on + strand, within H281DRAFT_03805 at 326.406 kb on - strand, within H281DRAFT_03805
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 323,559 - H281DRAFT_03802 0.54 -1.2 324,155 + -0.2 324,292 - -0.1 324,628 - H281DRAFT_03803 0.29 +0.6 324,628 - H281DRAFT_03803 0.29 +1.0 324,839 - H281DRAFT_03803 0.47 +0.8 324,839 - H281DRAFT_03803 0.47 +1.1 324,841 - H281DRAFT_03803 0.47 -0.0 325,007 + H281DRAFT_03803 0.61 +0.1 325,222 + H281DRAFT_03803 0.80 +0.2 325,415 + -0.3 325,415 + -1.0 325,584 - H281DRAFT_03804 0.42 +0.2 325,640 + H281DRAFT_03804 0.61 +0.5 325,727 + H281DRAFT_03804 0.89 +0.2 325,728 - H281DRAFT_03804 0.89 +0.3 325,748 + -0.7 325,748 + +0.3 325,765 + -0.7 325,765 + +0.3 325,765 + -1.1 325,830 - -0.0 325,835 + -0.3 325,867 + -0.2 325,889 - +0.8 325,938 + -0.6 325,939 - +0.2 325,939 - -0.4 326,060 - -0.5 326,060 - -0.5 326,349 - H281DRAFT_03805 0.29 +0.6 326,349 - H281DRAFT_03805 0.29 +0.4 326,392 + H281DRAFT_03805 0.33 -1.0 326,406 - H281DRAFT_03805 0.34 +0.0
Or see this region's nucleotide sequence