Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03747 and H281DRAFT_03748 are separated by 333 nucleotides H281DRAFT_03748 and H281DRAFT_03749 are separated by 27 nucleotides
H281DRAFT_03747: H281DRAFT_03747 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 262,757 to 263,989
_03747
H281DRAFT_03748: H281DRAFT_03748 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 264,323 to 265,096
_03748
H281DRAFT_03749: H281DRAFT_03749 - carbohydrate ABC transporter ATP-binding protein, CUT1 family, at 265,124 to 266,206
_03749
Position (kb) 264
265
266 Strain fitness (log2 ratio) -1
0
1 at 263.391 kb on - strand, within H281DRAFT_03747 at 263.391 kb on - strand, within H281DRAFT_03747 at 263.395 kb on - strand, within H281DRAFT_03747 at 263.395 kb on - strand, within H281DRAFT_03747 at 263.484 kb on - strand, within H281DRAFT_03747 at 263.544 kb on + strand, within H281DRAFT_03747 at 264.011 kb on + strand at 264.109 kb on + strand at 264.174 kb on - strand at 264.277 kb on - strand at 264.659 kb on + strand, within H281DRAFT_03748 at 264.659 kb on + strand, within H281DRAFT_03748 at 264.660 kb on - strand, within H281DRAFT_03748 at 264.660 kb on - strand, within H281DRAFT_03748 at 264.765 kb on - strand, within H281DRAFT_03748 at 264.932 kb on + strand, within H281DRAFT_03748 at 265.161 kb on - strand at 265.382 kb on + strand, within H281DRAFT_03749
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 263,391 - H281DRAFT_03747 0.51 -0.1 263,391 - H281DRAFT_03747 0.51 +0.2 263,395 - H281DRAFT_03747 0.52 +0.8 263,395 - H281DRAFT_03747 0.52 +0.0 263,484 - H281DRAFT_03747 0.59 +0.0 263,544 + H281DRAFT_03747 0.64 +0.1 264,011 + +0.5 264,109 + -0.4 264,174 - -0.4 264,277 - -0.5 264,659 + H281DRAFT_03748 0.43 +1.1 264,659 + H281DRAFT_03748 0.43 +1.0 264,660 - H281DRAFT_03748 0.44 +0.2 264,660 - H281DRAFT_03748 0.44 +0.3 264,765 - H281DRAFT_03748 0.57 -1.0 264,932 + H281DRAFT_03748 0.79 +0.5 265,161 - -0.7 265,382 + H281DRAFT_03749 0.24 +0.5
Or see this region's nucleotide sequence