Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03583 and H281DRAFT_03584 are separated by 11 nucleotides H281DRAFT_03584 and H281DRAFT_03585 are separated by 107 nucleotides H281DRAFT_03585 and H281DRAFT_03586 are separated by 48 nucleotides
H281DRAFT_03583: H281DRAFT_03583 - hypothetical protein, at 92,443 to 92,922
_03583
H281DRAFT_03584: H281DRAFT_03584 - transcriptional regulator, TetR family, at 92,934 to 93,647
_03584
H281DRAFT_03585: H281DRAFT_03585 - Polyisoprenoid-binding protein YceI, at 93,755 to 94,405
_03585
H281DRAFT_03586: H281DRAFT_03586 - L-threonine 3-dehydrogenase, at 94,454 to 95,485
_03586
Position (kb) 93
94
95 Strain fitness (log2 ratio) -1
0
1 at 92.984 kb on + strand at 92.984 kb on + strand at 93.352 kb on - strand, within H281DRAFT_03584 at 93.492 kb on - strand, within H281DRAFT_03584 at 93.492 kb on - strand, within H281DRAFT_03584 at 93.492 kb on - strand, within H281DRAFT_03584 at 93.493 kb on + strand, within H281DRAFT_03584 at 93.494 kb on - strand, within H281DRAFT_03584 at 93.503 kb on + strand, within H281DRAFT_03584 at 93.552 kb on + strand, within H281DRAFT_03584 at 93.553 kb on - strand, within H281DRAFT_03584 at 93.553 kb on - strand, within H281DRAFT_03584 at 93.565 kb on + strand at 93.565 kb on + strand, within H281DRAFT_03584 at 93.635 kb on + strand at 93.719 kb on + strand at 93.719 kb on + strand at 93.749 kb on + strand at 93.947 kb on + strand, within H281DRAFT_03585 at 93.948 kb on - strand, within H281DRAFT_03585 at 93.958 kb on + strand, within H281DRAFT_03585 at 94.300 kb on + strand, within H281DRAFT_03585 at 94.455 kb on + strand at 94.525 kb on - strand at 94.599 kb on + strand, within H281DRAFT_03586 at 94.600 kb on - strand, within H281DRAFT_03586 at 94.627 kb on - strand, within H281DRAFT_03586 at 94.627 kb on - strand, within H281DRAFT_03586 at 94.627 kb on - strand, within H281DRAFT_03586 at 94.627 kb on - strand, within H281DRAFT_03586 at 95.115 kb on + strand, within H281DRAFT_03586 at 95.141 kb on + strand, within H281DRAFT_03586 at 95.162 kb on - strand, within H281DRAFT_03586 at 95.162 kb on - strand, within H281DRAFT_03586 at 95.292 kb on + strand, within H281DRAFT_03586 at 95.293 kb on - strand, within H281DRAFT_03586 at 95.356 kb on + strand, within H281DRAFT_03586
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 92,984 + -0.0 92,984 + -0.2 93,352 - H281DRAFT_03584 0.59 -0.6 93,492 - H281DRAFT_03584 0.78 -0.4 93,492 - H281DRAFT_03584 0.78 -1.2 93,492 - H281DRAFT_03584 0.78 -0.3 93,493 + H281DRAFT_03584 0.78 -0.4 93,494 - H281DRAFT_03584 0.78 -0.5 93,503 + H281DRAFT_03584 0.80 +0.0 93,552 + H281DRAFT_03584 0.87 -0.5 93,553 - H281DRAFT_03584 0.87 -1.2 93,553 - H281DRAFT_03584 0.87 +0.3 93,565 + -0.1 93,565 + H281DRAFT_03584 0.88 -0.2 93,635 + -0.7 93,719 + -0.3 93,719 + -1.4 93,749 + -0.4 93,947 + H281DRAFT_03585 0.29 -1.2 93,948 - H281DRAFT_03585 0.30 -0.2 93,958 + H281DRAFT_03585 0.31 +0.5 94,300 + H281DRAFT_03585 0.84 -1.2 94,455 + -0.2 94,525 - +0.4 94,599 + H281DRAFT_03586 0.14 -0.4 94,600 - H281DRAFT_03586 0.14 -0.4 94,627 - H281DRAFT_03586 0.17 +0.5 94,627 - H281DRAFT_03586 0.17 +1.4 94,627 - H281DRAFT_03586 0.17 -0.5 94,627 - H281DRAFT_03586 0.17 +0.2 95,115 + H281DRAFT_03586 0.64 +0.1 95,141 + H281DRAFT_03586 0.67 -0.6 95,162 - H281DRAFT_03586 0.69 +0.3 95,162 - H281DRAFT_03586 0.69 -0.1 95,292 + H281DRAFT_03586 0.81 +0.2 95,293 - H281DRAFT_03586 0.81 -0.1 95,356 + H281DRAFT_03586 0.87 -0.4
Or see this region's nucleotide sequence