Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02943 and H281DRAFT_02944 are separated by 96 nucleotides H281DRAFT_02944 and H281DRAFT_02945 are separated by 1 nucleotides
H281DRAFT_02943: H281DRAFT_02943 - DNA-binding transcriptional regulator, LysR family, at 555,719 to 556,633
_02943
H281DRAFT_02944: H281DRAFT_02944 - aldehyde dehydrogenase (NAD+), at 556,730 to 558,169
_02944
H281DRAFT_02945: H281DRAFT_02945 - ectoine hydroxylase, at 558,171 to 559,016
_02945
Position (kb) 556
557
558
559 Strain fitness (log2 ratio) -1
0
1 at 556.294 kb on + strand, within H281DRAFT_02943 at 556.333 kb on + strand, within H281DRAFT_02943 at 556.512 kb on - strand, within H281DRAFT_02943 at 556.512 kb on - strand, within H281DRAFT_02943 at 556.615 kb on + strand at 556.616 kb on - strand at 556.765 kb on + strand at 556.838 kb on + strand at 556.838 kb on + strand at 557.301 kb on - strand, within H281DRAFT_02944 at 558.107 kb on + strand at 558.108 kb on - strand at 558.365 kb on + strand, within H281DRAFT_02945 at 558.571 kb on + strand, within H281DRAFT_02945 at 558.571 kb on + strand, within H281DRAFT_02945 at 558.571 kb on + strand, within H281DRAFT_02945 at 558.572 kb on - strand, within H281DRAFT_02945 at 558.572 kb on - strand, within H281DRAFT_02945 at 558.572 kb on - strand, within H281DRAFT_02945 at 558.641 kb on - strand, within H281DRAFT_02945 at 558.659 kb on - strand, within H281DRAFT_02945 at 558.722 kb on + strand, within H281DRAFT_02945 at 558.722 kb on + strand, within H281DRAFT_02945 at 558.734 kb on - strand, within H281DRAFT_02945 at 558.734 kb on - strand, within H281DRAFT_02945 at 558.734 kb on - strand, within H281DRAFT_02945 at 558.734 kb on - strand, within H281DRAFT_02945 at 559.059 kb on + strand at 559.144 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 556,294 + H281DRAFT_02943 0.63 -0.0 556,333 + H281DRAFT_02943 0.67 -0.2 556,512 - H281DRAFT_02943 0.87 -0.9 556,512 - H281DRAFT_02943 0.87 -0.7 556,615 + +0.4 556,616 - +0.3 556,765 + +0.1 556,838 + -0.7 556,838 + +0.3 557,301 - H281DRAFT_02944 0.40 -0.6 558,107 + +0.5 558,108 - +1.1 558,365 + H281DRAFT_02945 0.23 -0.6 558,571 + H281DRAFT_02945 0.47 +0.3 558,571 + H281DRAFT_02945 0.47 -0.8 558,571 + H281DRAFT_02945 0.47 +0.3 558,572 - H281DRAFT_02945 0.47 +0.1 558,572 - H281DRAFT_02945 0.47 +0.4 558,572 - H281DRAFT_02945 0.47 -0.6 558,641 - H281DRAFT_02945 0.56 +0.3 558,659 - H281DRAFT_02945 0.58 +0.1 558,722 + H281DRAFT_02945 0.65 +0.2 558,722 + H281DRAFT_02945 0.65 +0.5 558,734 - H281DRAFT_02945 0.67 +0.2 558,734 - H281DRAFT_02945 0.67 -0.2 558,734 - H281DRAFT_02945 0.67 +0.2 558,734 - H281DRAFT_02945 0.67 -0.4 559,059 + -0.0 559,144 + -0.6
Or see this region's nucleotide sequence