Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02763 and H281DRAFT_02764 overlap by 4 nucleotides H281DRAFT_02764 and H281DRAFT_02765 are separated by 98 nucleotides H281DRAFT_02765 and H281DRAFT_02766 are separated by 146 nucleotides
H281DRAFT_02763: H281DRAFT_02763 - selenium-binding protein 1, at 351,228 to 352,634
_02763
H281DRAFT_02764: H281DRAFT_02764 - hypothetical protein, at 352,631 to 353,308
_02764
H281DRAFT_02765: H281DRAFT_02765 - Protein of unknown function (DUF2795), at 353,407 to 353,640
_02765
H281DRAFT_02766: H281DRAFT_02766 - hypothetical protein, at 353,787 to 355,844
_02766
Position (kb) 352
353
354 Strain fitness (log2 ratio) -1
0
1 at 351.666 kb on + strand, within H281DRAFT_02763 at 351.667 kb on - strand, within H281DRAFT_02763 at 351.825 kb on + strand, within H281DRAFT_02763 at 351.827 kb on + strand, within H281DRAFT_02763 at 351.828 kb on - strand, within H281DRAFT_02763 at 352.230 kb on + strand, within H281DRAFT_02763 at 352.231 kb on - strand, within H281DRAFT_02763 at 352.236 kb on + strand, within H281DRAFT_02763 at 352.273 kb on - strand, within H281DRAFT_02763 at 352.689 kb on - strand at 353.180 kb on + strand, within H281DRAFT_02764 at 353.181 kb on - strand, within H281DRAFT_02764 at 353.191 kb on - strand, within H281DRAFT_02764 at 353.392 kb on + strand at 353.716 kb on - strand at 353.727 kb on + strand at 353.956 kb on - strand at 354.085 kb on - strand, within H281DRAFT_02766 at 354.144 kb on + strand, within H281DRAFT_02766
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 351,666 + H281DRAFT_02763 0.31 -0.8 351,667 - H281DRAFT_02763 0.31 +1.1 351,825 + H281DRAFT_02763 0.42 +0.1 351,827 + H281DRAFT_02763 0.43 -0.5 351,828 - H281DRAFT_02763 0.43 +0.2 352,230 + H281DRAFT_02763 0.71 +0.2 352,231 - H281DRAFT_02763 0.71 +0.2 352,236 + H281DRAFT_02763 0.72 +0.2 352,273 - H281DRAFT_02763 0.74 +0.2 352,689 - +0.0 353,180 + H281DRAFT_02764 0.81 +0.4 353,181 - H281DRAFT_02764 0.81 +1.0 353,191 - H281DRAFT_02764 0.83 -0.1 353,392 + -1.1 353,716 - +0.2 353,727 + -0.2 353,956 - -0.3 354,085 - H281DRAFT_02766 0.14 -0.0 354,144 + H281DRAFT_02766 0.17 +0.9
Or see this region's nucleotide sequence