Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02642 and H281DRAFT_02643 are separated by 133 nucleotides H281DRAFT_02643 and H281DRAFT_02644 are separated by 221 nucleotides
H281DRAFT_02642: H281DRAFT_02642 - Glycosyl hydrolase family 63 C-terminal domain-containing protein, at 219,503 to 222,238
_02642
H281DRAFT_02643: H281DRAFT_02643 - hypothetical protein, at 222,372 to 223,052
_02643
H281DRAFT_02644: H281DRAFT_02644 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase, at 223,274 to 224,830
_02644
Position (kb) 222
223
224 Strain fitness (log2 ratio) -2
-1
0
1 at 221.624 kb on + strand, within H281DRAFT_02642 at 221.681 kb on + strand, within H281DRAFT_02642 at 221.727 kb on - strand, within H281DRAFT_02642 at 221.840 kb on - strand at 222.133 kb on - strand at 222.299 kb on + strand at 222.353 kb on + strand at 222.353 kb on + strand at 222.832 kb on + strand, within H281DRAFT_02643 at 223.047 kb on - strand at 223.052 kb on + strand at 223.121 kb on + strand at 223.121 kb on + strand at 223.121 kb on + strand at 223.122 kb on - strand at 223.122 kb on - strand at 223.124 kb on - strand at 223.124 kb on - strand at 223.962 kb on + strand, within H281DRAFT_02644 at 223.962 kb on + strand, within H281DRAFT_02644 at 223.987 kb on + strand, within H281DRAFT_02644
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 221,624 + H281DRAFT_02642 0.78 -1.6 221,681 + H281DRAFT_02642 0.80 +0.1 221,727 - H281DRAFT_02642 0.81 +0.4 221,840 - -1.4 222,133 - +0.6 222,299 + +0.7 222,353 + +0.5 222,353 + +0.4 222,832 + H281DRAFT_02643 0.68 +0.8 223,047 - -0.0 223,052 + -0.1 223,121 + -0.8 223,121 + +0.1 223,121 + +0.0 223,122 - -0.3 223,122 - -0.9 223,124 - +0.9 223,124 - +0.1 223,962 + H281DRAFT_02644 0.44 -0.2 223,962 + H281DRAFT_02644 0.44 +0.2 223,987 + H281DRAFT_02644 0.46 -2.0
Or see this region's nucleotide sequence