Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02385 and H281DRAFT_02386 overlap by 4 nucleotides H281DRAFT_02386 and H281DRAFT_02387 are separated by 78 nucleotides H281DRAFT_02387 and H281DRAFT_02388 are separated by 18 nucleotides
H281DRAFT_02385: H281DRAFT_02385 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 549,513 to 551,471
_02385
H281DRAFT_02386: H281DRAFT_02386 - 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170), at 551,468 to 552,151
_02386
H281DRAFT_02387: H281DRAFT_02387 - chromosome segregation ATPase, at 552,230 to 553,021
_02387
H281DRAFT_02388: H281DRAFT_02388 - chromosome segregation DNA-binding protein, at 553,040 to 553,927
_02388
Position (kb) 551
552
553 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 551.529 kb on + strand at 551.582 kb on + strand, within H281DRAFT_02386 at 551.583 kb on - strand, within H281DRAFT_02386 at 551.583 kb on - strand, within H281DRAFT_02386 at 551.615 kb on + strand, within H281DRAFT_02386 at 551.616 kb on - strand, within H281DRAFT_02386 at 551.616 kb on - strand, within H281DRAFT_02386 at 551.664 kb on + strand, within H281DRAFT_02386 at 551.664 kb on + strand, within H281DRAFT_02386 at 551.664 kb on + strand, within H281DRAFT_02386 at 551.664 kb on + strand, within H281DRAFT_02386 at 551.664 kb on + strand, within H281DRAFT_02386 at 551.665 kb on - strand, within H281DRAFT_02386 at 551.665 kb on - strand at 551.665 kb on - strand, within H281DRAFT_02386 at 551.665 kb on - strand, within H281DRAFT_02386 at 551.883 kb on + strand, within H281DRAFT_02386 at 551.884 kb on - strand, within H281DRAFT_02386 at 551.928 kb on + strand, within H281DRAFT_02386 at 551.929 kb on - strand, within H281DRAFT_02386 at 551.929 kb on - strand, within H281DRAFT_02386 at 551.938 kb on + strand, within H281DRAFT_02386 at 551.938 kb on + strand, within H281DRAFT_02386 at 551.968 kb on + strand, within H281DRAFT_02386 at 552.149 kb on + strand at 553.019 kb on + strand at 553.019 kb on + strand at 553.019 kb on + strand at 553.019 kb on + strand at 553.019 kb on + strand at 553.019 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 551,529 + +0.2 551,582 + H281DRAFT_02386 0.17 -0.5 551,583 - H281DRAFT_02386 0.17 +0.5 551,583 - H281DRAFT_02386 0.17 -0.3 551,615 + H281DRAFT_02386 0.21 -0.3 551,616 - H281DRAFT_02386 0.22 +0.0 551,616 - H281DRAFT_02386 0.22 -2.0 551,664 + H281DRAFT_02386 0.29 -0.7 551,664 + H281DRAFT_02386 0.29 -0.4 551,664 + H281DRAFT_02386 0.29 -1.5 551,664 + H281DRAFT_02386 0.29 +0.0 551,664 + H281DRAFT_02386 0.29 -0.4 551,665 - H281DRAFT_02386 0.29 -0.6 551,665 - -0.5 551,665 - H281DRAFT_02386 0.29 -1.1 551,665 - H281DRAFT_02386 0.29 -0.1 551,883 + H281DRAFT_02386 0.61 -1.5 551,884 - H281DRAFT_02386 0.61 -1.2 551,928 + H281DRAFT_02386 0.67 -0.8 551,929 - H281DRAFT_02386 0.67 -0.4 551,929 - H281DRAFT_02386 0.67 -1.0 551,938 + H281DRAFT_02386 0.69 -0.6 551,938 + H281DRAFT_02386 0.69 +0.9 551,968 + H281DRAFT_02386 0.73 -1.8 552,149 + -1.7 553,019 + -0.3 553,019 + +0.6 553,019 + -0.3 553,019 + -1.6 553,019 + -2.8 553,019 + -1.2
Or see this region's nucleotide sequence