Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01709 and H281DRAFT_01710 are separated by 182 nucleotides H281DRAFT_01710 and H281DRAFT_01711 are separated by 566 nucleotides H281DRAFT_01711 and H281DRAFT_01712 are separated by 271 nucleotides
H281DRAFT_01709: H281DRAFT_01709 - hypothetical protein, at 595,150 to 595,962
_01709
H281DRAFT_01710: H281DRAFT_01710 - hypothetical protein, at 596,145 to 596,270
_01710
H281DRAFT_01711: H281DRAFT_01711 - Na/Pi-cotransporter, at 596,837 to 597,793
_01711
H281DRAFT_01712: H281DRAFT_01712 - polyphosphate kinase 2, PA0141 family, at 598,065 to 598,889
_01712
Position (kb) 596
597
598 Strain fitness (log2 ratio) -1
0
1 at 596.026 kb on - strand at 596.130 kb on - strand at 596.268 kb on + strand at 596.282 kb on - strand at 596.287 kb on + strand at 596.527 kb on - strand at 596.533 kb on + strand at 596.701 kb on - strand at 596.838 kb on + strand at 596.941 kb on + strand, within H281DRAFT_01711 at 597.036 kb on + strand, within H281DRAFT_01711 at 597.146 kb on - strand, within H281DRAFT_01711 at 597.885 kb on + strand at 597.890 kb on - strand at 598.066 kb on + strand at 598.100 kb on - strand at 598.189 kb on - strand at 598.306 kb on + strand, within H281DRAFT_01712 at 598.420 kb on + strand, within H281DRAFT_01712 at 598.543 kb on + strand, within H281DRAFT_01712 at 598.610 kb on - strand, within H281DRAFT_01712 at 598.743 kb on + strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 596,026 - +0.0 596,130 - -1.7 596,268 + +0.4 596,282 - -0.0 596,287 + -0.2 596,527 - +0.1 596,533 + +0.2 596,701 - -0.4 596,838 + -0.1 596,941 + H281DRAFT_01711 0.11 +0.6 597,036 + H281DRAFT_01711 0.21 +0.7 597,146 - H281DRAFT_01711 0.32 +0.3 597,885 + -0.1 597,890 - +0.2 598,066 + -0.6 598,100 - +0.1 598,189 - +0.9 598,306 + H281DRAFT_01712 0.29 -0.3 598,420 + H281DRAFT_01712 0.43 -0.8 598,543 + H281DRAFT_01712 0.58 +0.0 598,610 - H281DRAFT_01712 0.66 -0.3 598,743 + H281DRAFT_01712 0.82 +0.1 598,744 - H281DRAFT_01712 0.82 -0.2 598,744 - H281DRAFT_01712 0.82 -0.4 598,744 - H281DRAFT_01712 0.82 -0.4
Or see this region's nucleotide sequence