Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01204 and H281DRAFT_01205 are separated by 211 nucleotides H281DRAFT_01205 and H281DRAFT_01206 are separated by 162 nucleotides
H281DRAFT_01204: H281DRAFT_01204 - hypothetical protein, at 42,935 to 44,068
_01204
H281DRAFT_01205: H281DRAFT_01205 - transcriptional regulator, AraC family, at 44,280 to 45,317
_01205
H281DRAFT_01206: H281DRAFT_01206 - membrane-bound serine protease (ClpP class), at 45,480 to 47,114
_01206
Position (kb) 44
45
46 Strain fitness (log2 ratio) -2
-1
0
1 at 43.864 kb on - strand, within H281DRAFT_01204 at 43.873 kb on - strand, within H281DRAFT_01204 at 43.881 kb on + strand, within H281DRAFT_01204 at 44.055 kb on + strand at 44.056 kb on - strand at 44.105 kb on + strand at 44.184 kb on - strand at 44.184 kb on - strand at 44.292 kb on - strand at 44.459 kb on - strand, within H281DRAFT_01205 at 44.709 kb on + strand, within H281DRAFT_01205 at 44.709 kb on + strand, within H281DRAFT_01205 at 44.859 kb on + strand, within H281DRAFT_01205 at 44.860 kb on - strand, within H281DRAFT_01205 at 44.860 kb on - strand, within H281DRAFT_01205 at 44.962 kb on - strand, within H281DRAFT_01205 at 45.107 kb on + strand, within H281DRAFT_01205 at 45.108 kb on - strand, within H281DRAFT_01205 at 45.108 kb on - strand, within H281DRAFT_01205 at 45.111 kb on + strand, within H281DRAFT_01205 at 45.111 kb on + strand, within H281DRAFT_01205 at 45.112 kb on - strand, within H281DRAFT_01205 at 45.270 kb on + strand at 45.270 kb on + strand at 45.270 kb on + strand at 45.316 kb on - strand at 45.323 kb on - strand at 45.408 kb on + strand at 45.521 kb on - strand at 45.612 kb on - strand at 45.633 kb on - strand at 45.876 kb on + strand, within H281DRAFT_01206 at 45.876 kb on + strand, within H281DRAFT_01206 at 45.876 kb on + strand, within H281DRAFT_01206 at 45.877 kb on - strand, within H281DRAFT_01206 at 46.197 kb on + strand, within H281DRAFT_01206 at 46.197 kb on + strand, within H281DRAFT_01206 at 46.197 kb on + strand, within H281DRAFT_01206 at 46.198 kb on - strand, within H281DRAFT_01206 at 46.267 kb on + strand, within H281DRAFT_01206
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 43,864 - H281DRAFT_01204 0.82 -0.5 43,873 - H281DRAFT_01204 0.83 -0.3 43,881 + H281DRAFT_01204 0.83 -1.7 44,055 + -2.0 44,056 - -0.8 44,105 + -0.9 44,184 - -0.0 44,184 - -0.8 44,292 - -0.2 44,459 - H281DRAFT_01205 0.17 -2.0 44,709 + H281DRAFT_01205 0.41 -1.7 44,709 + H281DRAFT_01205 0.41 -1.6 44,859 + H281DRAFT_01205 0.56 -1.6 44,860 - H281DRAFT_01205 0.56 -0.6 44,860 - H281DRAFT_01205 0.56 -0.5 44,962 - H281DRAFT_01205 0.66 -1.5 45,107 + H281DRAFT_01205 0.80 -0.9 45,108 - H281DRAFT_01205 0.80 -0.4 45,108 - H281DRAFT_01205 0.80 -0.2 45,111 + H281DRAFT_01205 0.80 -0.6 45,111 + H281DRAFT_01205 0.80 -1.5 45,112 - H281DRAFT_01205 0.80 -1.1 45,270 + -1.7 45,270 + -1.2 45,270 + -1.1 45,316 - +0.2 45,323 - -0.0 45,408 + -0.7 45,521 - +0.7 45,612 - +1.6 45,633 - -0.5 45,876 + H281DRAFT_01206 0.24 +0.5 45,876 + H281DRAFT_01206 0.24 -0.0 45,876 + H281DRAFT_01206 0.24 +0.3 45,877 - H281DRAFT_01206 0.24 +0.2 46,197 + H281DRAFT_01206 0.44 +0.5 46,197 + H281DRAFT_01206 0.44 +0.1 46,197 + H281DRAFT_01206 0.44 +0.1 46,198 - H281DRAFT_01206 0.44 -0.2 46,267 + H281DRAFT_01206 0.48 -0.4
Or see this region's nucleotide sequence