Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00926 and H281DRAFT_00927 are separated by 77 nucleotides H281DRAFT_00927 and H281DRAFT_00928 overlap by 1 nucleotides H281DRAFT_00928 and H281DRAFT_00929 are separated by 95 nucleotides
H281DRAFT_00926: H281DRAFT_00926 - hypothetical protein, at 1,029,873 to 1,031,009
_00926
H281DRAFT_00927: H281DRAFT_00927 - UPF0755 protein, at 1,031,087 to 1,032,097
_00927
H281DRAFT_00928: H281DRAFT_00928 - thymidylate kinase, at 1,032,097 to 1,032,717
_00928
H281DRAFT_00929: H281DRAFT_00929 - DNA polymerase III, delta prime subunit, at 1,032,813 to 1,033,847
_00929
Position (kb)
1031
1032
1033 Strain fitness (log2 ratio)
-1
0
1 at 1031.056 kb on - strand at 1031.056 kb on - strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.414 kb on + strand, within H281DRAFT_00927 at 1031.588 kb on + strand, within H281DRAFT_00927 at 1031.624 kb on + strand, within H281DRAFT_00927 at 1031.624 kb on + strand, within H281DRAFT_00927 at 1031.696 kb on + strand, within H281DRAFT_00927 at 1031.708 kb on + strand, within H281DRAFT_00927 at 1031.709 kb on - strand, within H281DRAFT_00927 at 1031.840 kb on + strand, within H281DRAFT_00927 at 1031.908 kb on + strand, within H281DRAFT_00927 at 1031.912 kb on + strand, within H281DRAFT_00927 at 1031.914 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927 at 1032.080 kb on + strand at 1032.080 kb on + strand at 1032.731 kb on + strand at 1032.775 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 1,031,056 - +0.3 1,031,056 - -0.2 1,031,060 + +0.3 1,031,060 + +0.7 1,031,060 + +0.5 1,031,060 + -1.1 1,031,414 + H281DRAFT_00927 0.32 +0.2 1,031,588 + H281DRAFT_00927 0.50 -0.6 1,031,624 + H281DRAFT_00927 0.53 +0.4 1,031,624 + H281DRAFT_00927 0.53 -0.0 1,031,696 + H281DRAFT_00927 0.60 +0.9 1,031,708 + H281DRAFT_00927 0.61 +0.7 1,031,709 - H281DRAFT_00927 0.62 +0.8 1,031,840 + H281DRAFT_00927 0.74 +1.0 1,031,908 + H281DRAFT_00927 0.81 +1.4 1,031,912 + H281DRAFT_00927 0.82 +0.5 1,031,914 + H281DRAFT_00927 0.82 +0.8 1,031,941 + H281DRAFT_00927 0.84 -0.5 1,031,941 + H281DRAFT_00927 0.84 +0.7 1,031,941 + H281DRAFT_00927 0.84 +1.1 1,032,080 + -0.2 1,032,080 + +1.5 1,032,731 + -0.4 1,032,775 + +0.1
Or see this region's nucleotide sequence