Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00425 and H281DRAFT_00426 are separated by 805 nucleotides H281DRAFT_00426 and H281DRAFT_00427 are separated by 16 nucleotides
H281DRAFT_00425: H281DRAFT_00425 - Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin, at 464,314 to 465,384
_00425
H281DRAFT_00426: H281DRAFT_00426 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 466,190 to 467,701
_00426
H281DRAFT_00427: H281DRAFT_00427 - monosaccharide ABC transporter membrane protein, CUT2 family, at 467,718 to 468,743
_00427
Position (kb) 466
467
468 Strain fitness (log2 ratio) -1
0
1 at 465.244 kb on - strand, within H281DRAFT_00425 at 465.244 kb on - strand, within H281DRAFT_00425 at 465.508 kb on - strand at 465.508 kb on - strand at 465.679 kb on + strand at 465.981 kb on + strand at 465.982 kb on - strand at 465.982 kb on - strand at 466.847 kb on + strand, within H281DRAFT_00426 at 466.848 kb on - strand, within H281DRAFT_00426 at 467.040 kb on + strand, within H281DRAFT_00426 at 467.445 kb on + strand, within H281DRAFT_00426 at 467.502 kb on - strand, within H281DRAFT_00426 at 468.030 kb on + strand, within H281DRAFT_00427 at 468.030 kb on + strand, within H281DRAFT_00427 at 468.031 kb on - strand, within H281DRAFT_00427 at 468.128 kb on - strand, within H281DRAFT_00427 at 468.208 kb on - strand, within H281DRAFT_00427 at 468.231 kb on + strand, within H281DRAFT_00427 at 468.550 kb on + strand, within H281DRAFT_00427 at 468.620 kb on + strand, within H281DRAFT_00427 at 468.621 kb on - strand, within H281DRAFT_00427
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 465,244 - H281DRAFT_00425 0.87 +0.4 465,244 - H281DRAFT_00425 0.87 -0.0 465,508 - -0.0 465,508 - -0.1 465,679 + +0.7 465,981 + -0.0 465,982 - +0.4 465,982 - +0.8 466,847 + H281DRAFT_00426 0.43 +0.4 466,848 - H281DRAFT_00426 0.44 -0.8 467,040 + H281DRAFT_00426 0.56 +1.2 467,445 + H281DRAFT_00426 0.83 +0.2 467,502 - H281DRAFT_00426 0.87 +0.6 468,030 + H281DRAFT_00427 0.30 +0.3 468,030 + H281DRAFT_00427 0.30 +0.3 468,031 - H281DRAFT_00427 0.31 +0.0 468,128 - H281DRAFT_00427 0.40 +0.8 468,208 - H281DRAFT_00427 0.48 +0.0 468,231 + H281DRAFT_00427 0.50 +0.2 468,550 + H281DRAFT_00427 0.81 -0.8 468,620 + H281DRAFT_00427 0.88 +0.1 468,621 - H281DRAFT_00427 0.88 -0.8
Or see this region's nucleotide sequence