Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00289 and H281DRAFT_00290 are separated by 265 nucleotides H281DRAFT_00290 and H281DRAFT_00291 are separated by 58 nucleotides H281DRAFT_00291 and H281DRAFT_00292 are separated by 174 nucleotides
H281DRAFT_00289: H281DRAFT_00289 - MoxR-like ATPase, at 310,370 to 311,212
_00289
H281DRAFT_00290: H281DRAFT_00290 - Cytochrome c553, at 311,478 to 311,846
_00290
H281DRAFT_00291: H281DRAFT_00291 - Cytochrome c553, at 311,905 to 312,288
_00291
H281DRAFT_00292: H281DRAFT_00292 - protein of unknown function (DUF1841), at 312,463 to 312,897
_00292
Position (kb) 311
312 Strain fitness (log2 ratio) -2
-1
0
1 at 310.635 kb on + strand, within H281DRAFT_00289 at 310.686 kb on + strand, within H281DRAFT_00289 at 310.686 kb on + strand, within H281DRAFT_00289 at 310.686 kb on + strand, within H281DRAFT_00289 at 310.687 kb on - strand, within H281DRAFT_00289 at 310.687 kb on - strand, within H281DRAFT_00289 at 310.794 kb on + strand, within H281DRAFT_00289 at 310.800 kb on + strand, within H281DRAFT_00289 at 310.800 kb on + strand, within H281DRAFT_00289 at 310.800 kb on + strand, within H281DRAFT_00289 at 310.800 kb on + strand, within H281DRAFT_00289 at 310.801 kb on - strand, within H281DRAFT_00289 at 310.932 kb on + strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.933 kb on - strand, within H281DRAFT_00289 at 310.999 kb on - strand, within H281DRAFT_00289 at 311.004 kb on + strand, within H281DRAFT_00289 at 311.038 kb on + strand, within H281DRAFT_00289 at 311.039 kb on - strand, within H281DRAFT_00289 at 311.188 kb on - strand at 311.246 kb on - strand at 311.247 kb on + strand at 311.247 kb on + strand at 311.248 kb on - strand at 311.248 kb on - strand at 311.248 kb on - strand at 311.248 kb on - strand at 311.410 kb on + strand at 311.411 kb on - strand at 311.412 kb on + strand at 311.418 kb on + strand at 311.470 kb on + strand at 311.471 kb on - strand at 311.471 kb on - strand at 311.471 kb on - strand at 311.477 kb on + strand at 311.477 kb on + strand at 311.477 kb on + strand at 311.477 kb on + strand at 311.478 kb on - strand at 311.478 kb on - strand at 311.478 kb on - strand at 311.483 kb on + strand at 311.484 kb on - strand at 311.607 kb on - strand, within H281DRAFT_00290 at 311.607 kb on - strand, within H281DRAFT_00290 at 311.878 kb on + strand at 311.881 kb on + strand at 311.895 kb on - strand at 312.081 kb on - strand, within H281DRAFT_00291 at 312.121 kb on + strand, within H281DRAFT_00291 at 312.248 kb on - strand, within H281DRAFT_00291 at 312.248 kb on - strand, within H281DRAFT_00291 at 312.248 kb on - strand, within H281DRAFT_00291 at 312.287 kb on - strand at 312.770 kb on + strand, within H281DRAFT_00292 at 312.771 kb on - strand, within H281DRAFT_00292
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 310,635 + H281DRAFT_00289 0.31 +0.3 310,686 + H281DRAFT_00289 0.37 +0.2 310,686 + H281DRAFT_00289 0.37 -0.0 310,686 + H281DRAFT_00289 0.37 +0.2 310,687 - H281DRAFT_00289 0.38 -0.9 310,687 - H281DRAFT_00289 0.38 +0.7 310,794 + H281DRAFT_00289 0.50 +0.5 310,800 + H281DRAFT_00289 0.51 +0.5 310,800 + H281DRAFT_00289 0.51 -0.0 310,800 + H281DRAFT_00289 0.51 +0.2 310,800 + H281DRAFT_00289 0.51 -0.3 310,801 - H281DRAFT_00289 0.51 -0.4 310,932 + H281DRAFT_00289 0.67 -0.3 310,933 - H281DRAFT_00289 0.67 +0.3 310,933 - H281DRAFT_00289 0.67 -0.3 310,933 - H281DRAFT_00289 0.67 +0.6 310,933 - H281DRAFT_00289 0.67 +0.2 310,933 - H281DRAFT_00289 0.67 -0.1 310,933 - H281DRAFT_00289 0.67 +0.5 310,999 - H281DRAFT_00289 0.75 +0.3 311,004 + H281DRAFT_00289 0.75 -0.0 311,038 + H281DRAFT_00289 0.79 +0.3 311,039 - H281DRAFT_00289 0.79 +0.9 311,188 - -0.1 311,246 - +1.2 311,247 + +0.7 311,247 + -0.3 311,248 - -0.2 311,248 - -0.2 311,248 - +0.3 311,248 - +0.2 311,410 + +0.1 311,411 - -0.5 311,412 + -0.2 311,418 + -0.5 311,470 + -0.1 311,471 - -0.9 311,471 - -0.7 311,471 - -1.9 311,477 + -0.1 311,477 + -0.8 311,477 + -1.4 311,477 + -1.0 311,478 - -1.2 311,478 - -0.5 311,478 - -1.2 311,483 + -0.3 311,484 - -0.7 311,607 - H281DRAFT_00290 0.35 -2.4 311,607 - H281DRAFT_00290 0.35 -1.7 311,878 + +0.5 311,881 + +0.9 311,895 - -2.2 312,081 - H281DRAFT_00291 0.46 -1.1 312,121 + H281DRAFT_00291 0.56 +0.5 312,248 - H281DRAFT_00291 0.89 -0.6 312,248 - H281DRAFT_00291 0.89 -1.5 312,248 - H281DRAFT_00291 0.89 +0.3 312,287 - -0.3 312,770 + H281DRAFT_00292 0.71 +0.0 312,771 - H281DRAFT_00292 0.71 -0.3
Or see this region's nucleotide sequence