Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22750

Experiment: Glycine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (C)
2,357,799	+		PGA1_c22740	0.54	-0.5
2,357,807	-		PGA1_c22740	0.54	-1.6
2,357,954	+		PGA1_c22740	0.61	+0.7
2,357,975	+		PGA1_c22740	0.62	-1.2
2,357,993	-		PGA1_c22740	0.63	-0.7
2,357,993	-		PGA1_c22740	0.63	+0.3
2,357,993	-		PGA1_c22740	0.63	+1.5
2,357,995	-		PGA1_c22740	0.63	-0.0
2,357,995	-		PGA1_c22740	0.63	+0.1
2,358,054	+		PGA1_c22740	0.66	-0.0
2,358,073	-		PGA1_c22740	0.67	-0.1
2,358,076	+		PGA1_c22740	0.67	+0.9
2,358,111	+		PGA1_c22740	0.69	+0.2
2,358,162	+		PGA1_c22740	0.71	-0.1
2,358,186	+		PGA1_c22740	0.72	-0.3
2,358,208	-		PGA1_c22740	0.73	+0.4
2,358,251	+		PGA1_c22740	0.75	-0.3
2,358,257	-		PGA1_c22740	0.76	+0.9
2,358,261	+		PGA1_c22740	0.76	+0.6
2,358,266	+		PGA1_c22740	0.76	+0.0
2,358,274	-		PGA1_c22740	0.76	-0.4
2,358,281	-		PGA1_c22740	0.77	-2.2
2,358,281	-		PGA1_c22740	0.77	-0.9
2,358,317	-		PGA1_c22740	0.79	-1.3
2,358,317	-		PGA1_c22740	0.79	-0.9
2,358,334	+		PGA1_c22740	0.79	+0.0
2,358,366	+		PGA1_c22740	0.81	-0.6
2,358,388	+		PGA1_c22740	0.82	+0.1
2,358,411	-		PGA1_c22740	0.83	-0.4
2,358,539	-		PGA1_c22740	0.89	+0.6
2,358,546	-		PGA1_c22740	0.89	-0.6
2,358,546	-		PGA1_c22740	0.89	-0.4
2,358,546	-		PGA1_c22740	0.89	+0.7
2,358,546	-		PGA1_c22740	0.89	+0.4
2,358,546	-		PGA1_c22740	0.89	+0.1
2,358,546	-		PGA1_c22740	0.89	+2.0
2,358,546	-		PGA1_c22740	0.89	+0.0
2,358,546	-		PGA1_c22740	0.89	-0.3
2,358,547	+		PGA1_c22740	0.89	+0.3
2,358,547	+		PGA1_c22740	0.89	+0.6
2,358,555	-		PGA1_c22740	0.90	+0.4
2,358,555	-		PGA1_c22740	0.90	-1.8
2,358,555	-		PGA1_c22740	0.90	+0.3
2,358,555	-		PGA1_c22740	0.90	+2.0
2,358,557	+		PGA1_c22740	0.90	-0.8
2,358,565	-				+0.1
2,358,636	+				+0.3
2,358,636	+				-0.7
2,358,636	+				-0.4
2,358,636	+				+0.7
2,358,636	+				+0.1
2,358,644	-				-0.2
2,358,644	-				-0.1
2,358,644	-				+0.7
2,358,646	+				+0.0
2,358,700	+				+0.2
2,358,700	+				+0.1
2,358,739	+				+0.4
2,358,747	+				-0.0
2,358,747	+				+0.3
2,358,747	+				-0.9
2,358,747	+				+0.1
2,358,747	+				-0.2
2,358,747	+				+1.0
2,358,747	+				-0.3
2,358,747	+				+0.4
2,358,747	+				+0.4
2,358,755	-				-0.2
2,358,755	-				+0.4
2,358,829	-				+0.9
2,358,837	+				-0.4
2,358,845	-				-0.8
2,358,858	-		PGA1_c22750	0.11	+0.7
2,358,964	-		PGA1_c22750	0.26	-0.3
2,359,008	+		PGA1_c22750	0.33	+0.3
2,359,008	+		PGA1_c22750	0.33	-0.5
2,359,015	+		PGA1_c22750	0.34	-0.6
2,359,016	-		PGA1_c22750	0.34	+0.0
2,359,016	-		PGA1_c22750	0.34	+0.7
2,359,020	+		PGA1_c22750	0.34	+1.4
2,359,028	-		PGA1_c22750	0.36	+0.8
2,359,028	-		PGA1_c22750	0.36	+0.6
2,359,083	+		PGA1_c22750	0.44	+1.5
2,359,098	+		PGA1_c22750	0.46	+0.1
2,359,104	+		PGA1_c22750	0.47	+1.1
2,359,104	+		PGA1_c22750	0.47	+0.2
2,359,104	+		PGA1_c22750	0.47	+1.2
2,359,104	+		PGA1_c22750	0.47	-0.1
2,359,107	-		PGA1_c22750	0.47	-0.2
2,359,112	-		PGA1_c22750	0.48	-0.9
2,359,118	+		PGA1_c22750	0.49	+1.6
2,359,133	+		PGA1_c22750	0.51	-0.4
2,359,133	+		PGA1_c22750	0.51	-0.2
2,359,133	+		PGA1_c22750	0.51	+1.7
2,359,133	+		PGA1_c22750	0.51	-0.2
2,359,141	-		PGA1_c22750	0.52	+0.0
2,359,141	-		PGA1_c22750	0.52	+0.4
2,359,147	-		PGA1_c22750	0.53	-0.3
2,359,147	-		PGA1_c22750	0.53	-0.9
2,359,210	+		PGA1_c22750	0.62	+0.7
2,359,210	+		PGA1_c22750	0.62	+0.5
2,359,230	+		PGA1_c22750	0.65	+1.6
2,359,288	+		PGA1_c22750	0.73	+1.6
2,359,296	-		PGA1_c22750	0.75	+1.3
2,359,296	-		PGA1_c22750	0.75	+0.4
2,359,296	-		PGA1_c22750	0.75	-1.2
2,359,335	+		PGA1_c22750	0.80	-1.2
2,359,343	+		PGA1_c22750	0.81	+2.7
2,359,343	+		PGA1_c22750	0.81	+0.4
2,359,351	-		PGA1_c22750	0.83	+0.3
2,359,351	-		PGA1_c22750	0.83	-0.2
2,359,351	-		PGA1_c22750	0.83	-1.6
2,359,358	+		PGA1_c22750	0.84	-0.0
2,359,380	+		PGA1_c22750	0.87	-0.0
2,359,380	+		PGA1_c22750	0.87	-0.5
2,359,380	+		PGA1_c22750	0.87	-0.1
2,359,388	-		PGA1_c22750	0.88	+1.0
2,359,388	-		PGA1_c22750	0.88	+0.4
2,359,403	+				-0.4
2,359,411	-				+0.6
2,359,425	+				+1.0
2,359,428	-				-1.2
2,359,536	+				-0.2
2,359,569	+				+0.2
2,359,641	+		PGA1_c22760	0.11	+0.4
2,359,690	-		PGA1_c22760	0.14	-0.3
2,359,690	-		PGA1_c22760	0.14	+0.6
2,359,754	+		PGA1_c22760	0.18	+0.2
2,359,798	+		PGA1_c22760	0.21	+0.8
2,359,818	-		PGA1_c22760	0.22	-1.3
2,359,818	-		PGA1_c22760	0.22	-0.4
2,359,883	-		PGA1_c22760	0.26	-0.7
2,359,885	-		PGA1_c22760	0.26	+0.7
2,359,896	-		PGA1_c22760	0.27	+1.0
2,359,906	-		PGA1_c22760	0.27	-0.4
2,359,906	-		PGA1_c22760	0.27	+0.4
2,359,931	+		PGA1_c22760	0.29	-0.9
2,359,931	+		PGA1_c22760	0.29	-0.8
2,359,939	+		PGA1_c22760	0.29	+1.4
2,359,947	-		PGA1_c22760	0.30	-0.5
2,360,056	+		PGA1_c22760	0.37	+1.3
2,360,088	+		PGA1_c22760	0.39	-0.1
2,360,115	+		PGA1_c22760	0.40	+0.5
2,360,123	-		PGA1_c22760	0.41	+0.4
2,360,140	-		PGA1_c22760	0.42	+0.4
2,360,152	+		PGA1_c22760	0.43	+0.4
2,360,206	-		PGA1_c22760	0.46	+0.4
2,360,208	+		PGA1_c22760	0.46	-0.2
2,360,229	+		PGA1_c22760	0.47	-0.4
2,360,237	-		PGA1_c22760	0.48	+0.1
2,360,237	-		PGA1_c22760	0.48	+0.4
2,360,238	+		PGA1_c22760	0.48	+0.4
2,360,263	+		PGA1_c22760	0.50	+1.2
2,360,328	-		PGA1_c22760	0.54	+0.6
2,360,340	+		PGA1_c22760	0.54	-0.3
2,360,340	+		PGA1_c22760	0.54	+0.4
2,360,343	-		PGA1_c22760	0.55	+1.5
2,360,349	-		PGA1_c22760	0.55	-0.6
2,360,359	-		PGA1_c22760	0.56	+0.3
2,360,393	-		PGA1_c22760	0.58	+1.4