Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23655

Experiment: Casamino Acids (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23650 and BWI76_RS23655 are separated by 112 nucleotidesBWI76_RS23655 and BWI76_RS23660 are separated by 47 nucleotides BWI76_RS23650: BWI76_RS23650 - MFS transporter, at 4,935,428 to 4,936,975 _RS23650 BWI76_RS23655: BWI76_RS23655 - DeoR family transcriptional regulator, at 4,937,088 to 4,937,861 _RS23655 BWI76_RS23660: BWI76_RS23660 - pentose kinase, at 4,937,909 to 4,939,414 _RS23660 Position (kb) 4937 4938Strain fitness (log2 ratio) -2 -1 0 1at 4936.093 kb on + strand, within BWI76_RS23650at 4936.101 kb on - strand, within BWI76_RS23650at 4936.149 kb on + strand, within BWI76_RS23650at 4936.157 kb on - strand, within BWI76_RS23650at 4936.157 kb on - strandat 4936.157 kb on - strand, within BWI76_RS23650at 4936.157 kb on - strand, within BWI76_RS23650at 4936.380 kb on + strand, within BWI76_RS23650at 4936.511 kb on - strand, within BWI76_RS23650at 4936.582 kb on - strand, within BWI76_RS23650at 4936.710 kb on + strand, within BWI76_RS23650at 4936.783 kb on + strand, within BWI76_RS23650at 4936.849 kb on + strandat 4936.882 kb on - strandat 4936.969 kb on - strandat 4936.985 kb on + strandat 4937.187 kb on - strand, within BWI76_RS23655at 4937.187 kb on - strand, within BWI76_RS23655at 4937.221 kb on + strand, within BWI76_RS23655at 4937.656 kb on + strand, within BWI76_RS23655at 4937.664 kb on - strand, within BWI76_RS23655at 4937.713 kb on - strand, within BWI76_RS23655at 4937.945 kb on + strandat 4937.988 kb on + strandat 4937.996 kb on - strandat 4938.292 kb on - strand, within BWI76_RS23660at 4938.293 kb on + strand, within BWI76_RS23660at 4938.301 kb on - strand, within BWI76_RS23660at 4938.301 kb on - strand, within BWI76_RS23660at 4938.529 kb on + strand, within BWI76_RS23660at 4938.669 kb on - strand, within BWI76_RS23660at 4938.781 kb on + strand, within BWI76_RS23660

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino Acids (N)
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4,936,093 + BWI76_RS23650 0.43 -0.1
4,936,101 - BWI76_RS23650 0.43 +0.3
4,936,149 + BWI76_RS23650 0.47 +0.8
4,936,157 - BWI76_RS23650 0.47 +0.3
4,936,157 - +1.3
4,936,157 - BWI76_RS23650 0.47 +0.2
4,936,157 - BWI76_RS23650 0.47 -2.6
4,936,380 + BWI76_RS23650 0.61 +0.7
4,936,511 - BWI76_RS23650 0.70 -0.8
4,936,582 - BWI76_RS23650 0.75 +0.2
4,936,710 + BWI76_RS23650 0.83 -0.2
4,936,783 + BWI76_RS23650 0.88 -1.4
4,936,849 + +1.1
4,936,882 - +0.3
4,936,969 - +0.7
4,936,985 + -0.7
4,937,187 - BWI76_RS23655 0.13 -0.1
4,937,187 - BWI76_RS23655 0.13 -1.4
4,937,221 + BWI76_RS23655 0.17 -1.8
4,937,656 + BWI76_RS23655 0.73 -1.9
4,937,664 - BWI76_RS23655 0.74 -2.1
4,937,713 - BWI76_RS23655 0.81 -1.0
4,937,945 + +0.4
4,937,988 + +0.7
4,937,996 - +0.4
4,938,292 - BWI76_RS23660 0.25 -0.0
4,938,293 + BWI76_RS23660 0.25 -0.0
4,938,301 - BWI76_RS23660 0.26 +0.2
4,938,301 - BWI76_RS23660 0.26 +0.5
4,938,529 + BWI76_RS23660 0.41 -0.4
4,938,669 - BWI76_RS23660 0.50 +0.7
4,938,781 + BWI76_RS23660 0.58 +0.8

Or see this region's nucleotide sequence