Experiment: Casamino Acids (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23650 and BWI76_RS23655 are separated by 112 nucleotides BWI76_RS23655 and BWI76_RS23660 are separated by 47 nucleotides
BWI76_RS23650: BWI76_RS23650 - MFS transporter, at 4,935,428 to 4,936,975
_RS23650
BWI76_RS23655: BWI76_RS23655 - DeoR family transcriptional regulator, at 4,937,088 to 4,937,861
_RS23655
BWI76_RS23660: BWI76_RS23660 - pentose kinase, at 4,937,909 to 4,939,414
_RS23660
Position (kb)
4937
4938 Strain fitness (log2 ratio)
-2
-1
0
1 at 4936.093 kb on + strand, within BWI76_RS23650 at 4936.101 kb on - strand, within BWI76_RS23650 at 4936.149 kb on + strand, within BWI76_RS23650 at 4936.157 kb on - strand, within BWI76_RS23650 at 4936.157 kb on - strand at 4936.157 kb on - strand, within BWI76_RS23650 at 4936.157 kb on - strand, within BWI76_RS23650 at 4936.380 kb on + strand, within BWI76_RS23650 at 4936.511 kb on - strand, within BWI76_RS23650 at 4936.582 kb on - strand, within BWI76_RS23650 at 4936.710 kb on + strand, within BWI76_RS23650 at 4936.783 kb on + strand, within BWI76_RS23650 at 4936.849 kb on + strand at 4936.882 kb on - strand at 4936.969 kb on - strand at 4936.985 kb on + strand at 4937.187 kb on - strand, within BWI76_RS23655 at 4937.187 kb on - strand, within BWI76_RS23655 at 4937.221 kb on + strand, within BWI76_RS23655 at 4937.656 kb on + strand, within BWI76_RS23655 at 4937.664 kb on - strand, within BWI76_RS23655 at 4937.713 kb on - strand, within BWI76_RS23655 at 4937.945 kb on + strand at 4937.988 kb on + strand at 4937.996 kb on - strand at 4938.292 kb on - strand, within BWI76_RS23660 at 4938.293 kb on + strand, within BWI76_RS23660 at 4938.301 kb on - strand, within BWI76_RS23660 at 4938.301 kb on - strand, within BWI76_RS23660 at 4938.529 kb on + strand, within BWI76_RS23660 at 4938.669 kb on - strand, within BWI76_RS23660 at 4938.781 kb on + strand, within BWI76_RS23660
Per-strain Table
Position Strand Gene LocusTag Fraction Casamino Acids (N) remove 4,936,093 + BWI76_RS23650 0.43 -0.1 4,936,101 - BWI76_RS23650 0.43 +0.3 4,936,149 + BWI76_RS23650 0.47 +0.8 4,936,157 - BWI76_RS23650 0.47 +0.3 4,936,157 - +1.3 4,936,157 - BWI76_RS23650 0.47 +0.2 4,936,157 - BWI76_RS23650 0.47 -2.6 4,936,380 + BWI76_RS23650 0.61 +0.7 4,936,511 - BWI76_RS23650 0.70 -0.8 4,936,582 - BWI76_RS23650 0.75 +0.2 4,936,710 + BWI76_RS23650 0.83 -0.2 4,936,783 + BWI76_RS23650 0.88 -1.4 4,936,849 + +1.1 4,936,882 - +0.3 4,936,969 - +0.7 4,936,985 + -0.7 4,937,187 - BWI76_RS23655 0.13 -0.1 4,937,187 - BWI76_RS23655 0.13 -1.4 4,937,221 + BWI76_RS23655 0.17 -1.8 4,937,656 + BWI76_RS23655 0.73 -1.9 4,937,664 - BWI76_RS23655 0.74 -2.1 4,937,713 - BWI76_RS23655 0.81 -1.0 4,937,945 + +0.4 4,937,988 + +0.7 4,937,996 - +0.4 4,938,292 - BWI76_RS23660 0.25 -0.0 4,938,293 + BWI76_RS23660 0.25 -0.0 4,938,301 - BWI76_RS23660 0.26 +0.2 4,938,301 - BWI76_RS23660 0.26 +0.5 4,938,529 + BWI76_RS23660 0.41 -0.4 4,938,669 - BWI76_RS23660 0.50 +0.7 4,938,781 + BWI76_RS23660 0.58 +0.8
Or see this region's nucleotide sequence