Experiment: Casamino Acids (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18500 and BWI76_RS18505 are separated by 50 nucleotides BWI76_RS18505 and BWI76_RS18510 are separated by 533 nucleotides
BWI76_RS18500: BWI76_RS18500 - cation transporting ATPase E1-E2 family protein, at 3,835,699 to 3,838,386
_RS18500
BWI76_RS18505: BWI76_RS18505 - universal stress family protein, at 3,838,437 to 3,838,868
_RS18505
BWI76_RS18510: BWI76_RS18510 - membrane protein, at 3,839,402 to 3,840,487
_RS18510
Position (kb)
3838
3839 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3837.822 kb on + strand, within BWI76_RS18500 at 3837.830 kb on - strand, within BWI76_RS18500 at 3837.980 kb on - strand, within BWI76_RS18500 at 3838.017 kb on + strand, within BWI76_RS18500 at 3838.083 kb on - strand, within BWI76_RS18500 at 3838.088 kb on - strand, within BWI76_RS18500 at 3838.115 kb on - strand, within BWI76_RS18500 at 3838.172 kb on - strand at 3838.223 kb on + strand at 3838.297 kb on + strand at 3838.423 kb on + strand at 3838.431 kb on - strand at 3838.431 kb on - strand at 3838.506 kb on + strand, within BWI76_RS18505 at 3838.514 kb on - strand, within BWI76_RS18505 at 3838.552 kb on - strand, within BWI76_RS18505 at 3838.607 kb on - strand, within BWI76_RS18505 at 3838.660 kb on - strand, within BWI76_RS18505 at 3838.779 kb on + strand, within BWI76_RS18505 at 3838.787 kb on - strand, within BWI76_RS18505 at 3838.787 kb on - strand, within BWI76_RS18505 at 3838.787 kb on - strand, within BWI76_RS18505 at 3838.791 kb on + strand, within BWI76_RS18505 at 3838.802 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.803 kb on + strand, within BWI76_RS18505 at 3838.804 kb on + strand, within BWI76_RS18505 at 3838.804 kb on + strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.811 kb on - strand, within BWI76_RS18505 at 3838.812 kb on - strand, within BWI76_RS18505 at 3838.817 kb on - strand, within BWI76_RS18505 at 3838.911 kb on - strand at 3838.913 kb on + strand at 3838.922 kb on + strand at 3838.925 kb on - strand at 3838.926 kb on - strand at 3838.928 kb on - strand at 3838.933 kb on - strand at 3838.983 kb on - strand at 3838.988 kb on - strand at 3839.042 kb on + strand at 3839.058 kb on - strand at 3839.058 kb on - strand at 3839.133 kb on + strand at 3839.141 kb on + strand at 3839.173 kb on + strand at 3839.234 kb on + strand at 3839.242 kb on + strand at 3839.242 kb on + strand at 3839.242 kb on + strand at 3839.243 kb on - strand at 3839.250 kb on - strand at 3839.257 kb on + strand at 3839.267 kb on + strand at 3839.275 kb on - strand at 3839.279 kb on + strand at 3839.287 kb on - strand at 3839.354 kb on + strand at 3839.378 kb on + strand at 3839.378 kb on + strand at 3839.378 kb on + strand at 3839.378 kb on + strand at 3839.378 kb on + strand at 3839.378 kb on + strand at 3839.380 kb on + strand at 3839.380 kb on + strand at 3839.386 kb on - strand at 3839.386 kb on - strand at 3839.398 kb on - strand at 3839.400 kb on - strand at 3839.400 kb on - strand at 3839.501 kb on + strand at 3839.502 kb on - strand at 3839.526 kb on + strand, within BWI76_RS18510 at 3839.526 kb on + strand, within BWI76_RS18510 at 3839.567 kb on - strand, within BWI76_RS18510 at 3839.670 kb on - strand, within BWI76_RS18510 at 3839.678 kb on + strand, within BWI76_RS18510 at 3839.812 kb on + strand, within BWI76_RS18510
Per-strain Table
Position Strand Gene LocusTag Fraction Casamino Acids (N) remove 3,837,822 + BWI76_RS18500 0.79 +1.7 3,837,830 - BWI76_RS18500 0.79 +0.9 3,837,980 - BWI76_RS18500 0.85 +1.7 3,838,017 + BWI76_RS18500 0.86 -0.6 3,838,083 - BWI76_RS18500 0.89 +0.4 3,838,088 - BWI76_RS18500 0.89 +0.2 3,838,115 - BWI76_RS18500 0.90 +0.6 3,838,172 - -0.2 3,838,223 + -0.3 3,838,297 + -2.5 3,838,423 + +0.7 3,838,431 - -0.5 3,838,431 - +1.5 3,838,506 + BWI76_RS18505 0.16 -2.0 3,838,514 - BWI76_RS18505 0.18 +0.7 3,838,552 - BWI76_RS18505 0.27 +0.5 3,838,607 - BWI76_RS18505 0.39 -0.6 3,838,660 - BWI76_RS18505 0.52 -3.3 3,838,779 + BWI76_RS18505 0.79 +2.2 3,838,787 - BWI76_RS18505 0.81 -1.0 3,838,787 - BWI76_RS18505 0.81 -0.2 3,838,787 - BWI76_RS18505 0.81 +0.2 3,838,791 + BWI76_RS18505 0.82 -1.5 3,838,802 + BWI76_RS18505 0.84 -0.5 3,838,803 + BWI76_RS18505 0.85 -1.7 3,838,803 + BWI76_RS18505 0.85 -1.2 3,838,803 + BWI76_RS18505 0.85 +0.5 3,838,803 + BWI76_RS18505 0.85 -1.9 3,838,803 + BWI76_RS18505 0.85 -2.1 3,838,803 + BWI76_RS18505 0.85 +1.7 3,838,803 + BWI76_RS18505 0.85 -1.5 3,838,803 + BWI76_RS18505 0.85 -0.1 3,838,803 + BWI76_RS18505 0.85 -0.2 3,838,803 + BWI76_RS18505 0.85 -2.5 3,838,803 + BWI76_RS18505 0.85 -3.5 3,838,803 + BWI76_RS18505 0.85 -0.3 3,838,803 + BWI76_RS18505 0.85 -0.2 3,838,803 + BWI76_RS18505 0.85 +2.4 3,838,804 + BWI76_RS18505 0.85 -1.1 3,838,804 + BWI76_RS18505 0.85 +1.8 3,838,811 - BWI76_RS18505 0.87 +0.8 3,838,811 - BWI76_RS18505 0.87 +0.2 3,838,811 - BWI76_RS18505 0.87 -2.5 3,838,811 - BWI76_RS18505 0.87 -2.5 3,838,811 - BWI76_RS18505 0.87 -0.2 3,838,811 - BWI76_RS18505 0.87 -3.0 3,838,811 - BWI76_RS18505 0.87 -1.3 3,838,811 - BWI76_RS18505 0.87 -1.6 3,838,811 - BWI76_RS18505 0.87 -2.2 3,838,811 - BWI76_RS18505 0.87 -0.5 3,838,811 - BWI76_RS18505 0.87 -3.2 3,838,811 - BWI76_RS18505 0.87 +1.2 3,838,811 - BWI76_RS18505 0.87 -1.0 3,838,811 - BWI76_RS18505 0.87 +0.9 3,838,812 - BWI76_RS18505 0.87 +0.6 3,838,817 - BWI76_RS18505 0.88 -1.6 3,838,911 - -1.7 3,838,913 + +0.6 3,838,922 + -0.2 3,838,925 - -0.5 3,838,926 - +0.9 3,838,928 - +2.2 3,838,933 - -0.9 3,838,983 - +1.0 3,838,988 - +1.1 3,839,042 + -0.7 3,839,058 - -0.4 3,839,058 - -1.6 3,839,133 + +0.2 3,839,141 + -0.2 3,839,173 + -1.7 3,839,234 + +0.7 3,839,242 + +0.3 3,839,242 + -0.9 3,839,242 + -0.3 3,839,243 - -0.2 3,839,250 - +0.5 3,839,257 + +1.0 3,839,267 + -0.4 3,839,275 - -0.5 3,839,279 + -0.4 3,839,287 - +0.7 3,839,354 + -0.4 3,839,378 + +0.6 3,839,378 + +1.2 3,839,378 + +1.9 3,839,378 + -3.2 3,839,378 + -0.1 3,839,378 + +0.3 3,839,380 + +0.3 3,839,380 + +0.2 3,839,386 - -1.6 3,839,386 - -2.3 3,839,398 - -1.6 3,839,400 - +1.2 3,839,400 - -0.3 3,839,501 + -1.2 3,839,502 - +2.3 3,839,526 + BWI76_RS18510 0.11 +0.8 3,839,526 + BWI76_RS18510 0.11 +0.7 3,839,567 - BWI76_RS18510 0.15 +0.2 3,839,670 - BWI76_RS18510 0.25 -1.0 3,839,678 + BWI76_RS18510 0.25 -0.4 3,839,812 + BWI76_RS18510 0.38 +0.8
Or see this region's nucleotide sequence