Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15270

Experiment: Casamino Acids (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15265 and BWI76_RS15270 are separated by 142 nucleotidesBWI76_RS15270 and BWI76_RS15275 are separated by 9 nucleotides BWI76_RS15265: BWI76_RS15265 - hypothetical protein, at 3,198,817 to 3,200,097 _RS15265 BWI76_RS15270: BWI76_RS15270 - phenazine biosynthesis protein PhzF family, at 3,200,240 to 3,201,028 _RS15270 BWI76_RS15275: BWI76_RS15275 - isomerase, at 3,201,038 to 3,201,829 _RS15275 Position (kb) 3200 3201 3202Strain fitness (log2 ratio) -3 -2 -1 0 1at 3199.362 kb on + strand, within BWI76_RS15265at 3199.771 kb on + strand, within BWI76_RS15265at 3199.810 kb on + strand, within BWI76_RS15265at 3199.825 kb on + strand, within BWI76_RS15265at 3199.860 kb on - strand, within BWI76_RS15265at 3199.892 kb on + strand, within BWI76_RS15265at 3199.906 kb on - strand, within BWI76_RS15265at 3200.165 kb on + strandat 3200.241 kb on - strandat 3200.246 kb on - strandat 3200.246 kb on - strandat 3200.653 kb on + strand, within BWI76_RS15270at 3200.875 kb on + strand, within BWI76_RS15270at 3200.896 kb on + strand, within BWI76_RS15270at 3201.277 kb on - strand, within BWI76_RS15275at 3201.401 kb on - strand, within BWI76_RS15275at 3201.406 kb on - strand, within BWI76_RS15275at 3201.664 kb on + strand, within BWI76_RS15275at 3201.839 kb on - strandat 3201.924 kb on + strandat 3202.023 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino Acids (N)
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3,199,362 + BWI76_RS15265 0.43 -3.0
3,199,771 + BWI76_RS15265 0.74 -0.1
3,199,810 + BWI76_RS15265 0.78 -0.7
3,199,825 + BWI76_RS15265 0.79 +0.9
3,199,860 - BWI76_RS15265 0.81 +0.0
3,199,892 + BWI76_RS15265 0.84 -0.6
3,199,906 - BWI76_RS15265 0.85 -1.5
3,200,165 + -1.1
3,200,241 - +0.3
3,200,246 - +0.4
3,200,246 - -0.5
3,200,653 + BWI76_RS15270 0.52 -0.2
3,200,875 + BWI76_RS15270 0.80 -2.1
3,200,896 + BWI76_RS15270 0.83 -0.7
3,201,277 - BWI76_RS15275 0.30 +0.2
3,201,401 - BWI76_RS15275 0.46 +0.8
3,201,406 - BWI76_RS15275 0.46 -2.0
3,201,664 + BWI76_RS15275 0.79 +0.6
3,201,839 - -0.3
3,201,924 + -1.9
3,202,023 + -1.5

Or see this region's nucleotide sequence