Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14305

Experiment: Casamino Acids (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14295 and BWI76_RS14300 overlap by 72 nucleotidesBWI76_RS14300 and BWI76_RS14305 are separated by 87 nucleotidesBWI76_RS14305 and BWI76_RS14310 are separated by 4 nucleotidesBWI76_RS14310 and BWI76_RS14315 overlap by 1 nucleotides BWI76_RS14295: BWI76_RS14295 - IS630 family transposase, at 2,988,739 to 2,989,680 _RS14295 BWI76_RS14300: BWI76_RS14300 - hypothetical protein, at 2,989,609 to 2,989,795 _RS14300 BWI76_RS14305: BWI76_RS14305 - metallophosphoesterase, at 2,989,883 to 2,990,668 _RS14305 BWI76_RS14310: BWI76_RS14310 - hypothetical protein, at 2,990,673 to 2,991,554 _RS14310 BWI76_RS14315: BWI76_RS14315 - MazG nucleotide pyrophosphohydrolase, at 2,991,554 to 2,991,892 _RS14315 Position (kb) 2989 2990 2991Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2988.999 kb on - strand, within BWI76_RS14295at 2989.053 kb on - strand, within BWI76_RS14295at 2989.125 kb on - strand, within BWI76_RS14295at 2989.275 kb on + strand, within BWI76_RS14295at 2989.275 kb on + strand, within BWI76_RS14295at 2989.275 kb on + strand, within BWI76_RS14295at 2989.283 kb on - strand, within BWI76_RS14295at 2989.283 kb on - strand, within BWI76_RS14295at 2989.286 kb on + strand, within BWI76_RS14295at 2989.294 kb on - strand, within BWI76_RS14295at 2989.452 kb on + strand, within BWI76_RS14295at 2989.453 kb on + strand, within BWI76_RS14295at 2989.454 kb on + strand, within BWI76_RS14295at 2989.462 kb on - strand, within BWI76_RS14295at 2989.502 kb on + strand, within BWI76_RS14295at 2989.535 kb on - strand, within BWI76_RS14295at 2989.665 kb on + strandat 2989.670 kb on + strandat 2989.701 kb on + strand, within BWI76_RS14300at 2989.715 kb on - strand, within BWI76_RS14300at 2989.728 kb on + strand, within BWI76_RS14300at 2989.731 kb on - strand, within BWI76_RS14300at 2989.731 kb on - strandat 2989.801 kb on + strandat 2989.806 kb on + strandat 2990.042 kb on + strand, within BWI76_RS14305at 2990.047 kb on + strand, within BWI76_RS14305at 2990.321 kb on + strand, within BWI76_RS14305at 2990.390 kb on + strand, within BWI76_RS14305at 2990.405 kb on + strand, within BWI76_RS14305at 2990.471 kb on + strand, within BWI76_RS14305at 2990.471 kb on + strand, within BWI76_RS14305at 2990.513 kb on + strand, within BWI76_RS14305at 2990.513 kb on + strand, within BWI76_RS14305at 2990.838 kb on + strand, within BWI76_RS14310at 2990.838 kb on + strand, within BWI76_RS14310at 2990.840 kb on + strand, within BWI76_RS14310at 2990.840 kb on + strandat 2990.848 kb on + strand, within BWI76_RS14310at 2990.850 kb on + strand, within BWI76_RS14310at 2990.985 kb on + strand, within BWI76_RS14310at 2991.214 kb on + strand, within BWI76_RS14310at 2991.275 kb on + strand, within BWI76_RS14310at 2991.275 kb on + strand, within BWI76_RS14310at 2991.275 kb on + strand, within BWI76_RS14310at 2991.294 kb on + strand, within BWI76_RS14310at 2991.307 kb on + strandat 2991.320 kb on + strand, within BWI76_RS14310at 2991.326 kb on + strand, within BWI76_RS14310at 2991.327 kb on + strand, within BWI76_RS14310at 2991.344 kb on + strand, within BWI76_RS14310at 2991.350 kb on + strand, within BWI76_RS14310at 2991.374 kb on + strand, within BWI76_RS14310at 2991.374 kb on + strand, within BWI76_RS14310at 2991.452 kb on + strand, within BWI76_RS14310at 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.491 kb on + strandat 2991.498 kb on + strandat 2991.498 kb on + strandat 2991.498 kb on + strandat 2991.498 kb on + strandat 2991.498 kb on + strandat 2991.498 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino Acids (N)
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2,988,999 - BWI76_RS14295 0.28 +0.6
2,989,053 - BWI76_RS14295 0.33 -1.3
2,989,125 - BWI76_RS14295 0.41 +0.5
2,989,275 + BWI76_RS14295 0.57 +0.3
2,989,275 + BWI76_RS14295 0.57 +2.0
2,989,275 + BWI76_RS14295 0.57 +0.9
2,989,283 - BWI76_RS14295 0.58 +1.1
2,989,283 - BWI76_RS14295 0.58 +0.7
2,989,286 + BWI76_RS14295 0.58 -0.7
2,989,294 - BWI76_RS14295 0.59 +0.7
2,989,452 + BWI76_RS14295 0.76 -1.8
2,989,453 + BWI76_RS14295 0.76 -0.1
2,989,454 + BWI76_RS14295 0.76 +1.2
2,989,462 - BWI76_RS14295 0.77 -1.8
2,989,502 + BWI76_RS14295 0.81 +0.0
2,989,535 - BWI76_RS14295 0.85 -0.1
2,989,665 + -0.3
2,989,670 + -1.0
2,989,701 + BWI76_RS14300 0.49 +0.2
2,989,715 - BWI76_RS14300 0.57 +0.4
2,989,728 + BWI76_RS14300 0.64 +0.8
2,989,731 - BWI76_RS14300 0.65 -1.7
2,989,731 - +1.0
2,989,801 + -0.6
2,989,806 + +1.8
2,990,042 + BWI76_RS14305 0.20 -2.3
2,990,047 + BWI76_RS14305 0.21 -0.1
2,990,321 + BWI76_RS14305 0.56 -0.6
2,990,390 + BWI76_RS14305 0.65 -1.6
2,990,405 + BWI76_RS14305 0.66 -1.5
2,990,471 + BWI76_RS14305 0.75 -1.6
2,990,471 + BWI76_RS14305 0.75 +0.7
2,990,513 + BWI76_RS14305 0.80 -3.0
2,990,513 + BWI76_RS14305 0.80 +1.0
2,990,838 + BWI76_RS14310 0.19 -1.6
2,990,838 + BWI76_RS14310 0.19 -2.8
2,990,840 + BWI76_RS14310 0.19 +2.5
2,990,840 + -1.2
2,990,848 + BWI76_RS14310 0.20 -0.3
2,990,850 + BWI76_RS14310 0.20 -0.0
2,990,985 + BWI76_RS14310 0.35 +0.6
2,991,214 + BWI76_RS14310 0.61 -3.6
2,991,275 + BWI76_RS14310 0.68 +1.4
2,991,275 + BWI76_RS14310 0.68 +1.5
2,991,275 + BWI76_RS14310 0.68 +1.4
2,991,294 + BWI76_RS14310 0.70 -0.8
2,991,307 + +0.4
2,991,320 + BWI76_RS14310 0.73 -0.6
2,991,326 + BWI76_RS14310 0.74 +1.1
2,991,327 + BWI76_RS14310 0.74 +0.6
2,991,344 + BWI76_RS14310 0.76 -0.3
2,991,350 + BWI76_RS14310 0.77 +0.4
2,991,374 + BWI76_RS14310 0.79 -0.0
2,991,374 + BWI76_RS14310 0.79 -3.1
2,991,452 + BWI76_RS14310 0.88 -1.5
2,991,491 + -3.0
2,991,491 + +1.2
2,991,491 + -0.0
2,991,491 + -0.3
2,991,491 + +0.8
2,991,491 + +1.7
2,991,491 + -1.5
2,991,498 + -1.3
2,991,498 + -1.5
2,991,498 + -1.1
2,991,498 + +0.2
2,991,498 + -0.8
2,991,498 + -1.3

Or see this region's nucleotide sequence