Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_000774 and ABIE53_000775 are separated by 39 nucleotides ABIE53_000775 and ABIE53_000776 are separated by 221 nucleotides ABIE53_000776 and ABIE53_000777 are separated by 72 nucleotides ABIE53_000777 and ABIE53_000778 are separated by 76 nucleotides
ABIE53_000774: ABIE53_000774 - ubiquinone biosynthesis protein, at 835,843 to 837,420
_000774
ABIE53_000775: ABIE53_000775 - hypothetical protein, at 837,460 to 838,095
_000775
ABIE53_000776: ABIE53_000776 - putative FmdB family regulatory protein, at 838,317 to 838,703
_000776
ABIE53_000777: ABIE53_000777 - putative membrane protein, at 838,776 to 839,429
_000777
ABIE53_000778: ABIE53_000778 - aspartyl-tRNA synthetase, at 839,506 to 841,305
_000778
Position (kb) 838
839 Strain fitness (log2 ratio) -2
-1
0
1
2 at 837.409 kb on + strand at 837.410 kb on - strand at 837.434 kb on + strand at 837.434 kb on + strand at 837.435 kb on - strand at 837.435 kb on - strand at 837.435 kb on - strand at 837.661 kb on + strand, within ABIE53_000775 at 837.661 kb on + strand, within ABIE53_000775 at 837.661 kb on + strand, within ABIE53_000775 at 837.661 kb on + strand, within ABIE53_000775 at 837.796 kb on + strand, within ABIE53_000775 at 837.796 kb on + strand, within ABIE53_000775 at 837.796 kb on + strand, within ABIE53_000775 at 837.796 kb on + strand, within ABIE53_000775 at 837.796 kb on + strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.797 kb on - strand, within ABIE53_000775 at 837.826 kb on + strand, within ABIE53_000775 at 837.826 kb on + strand, within ABIE53_000775 at 837.826 kb on + strand, within ABIE53_000775 at 837.826 kb on + strand, within ABIE53_000775 at 837.826 kb on + strand, within ABIE53_000775 at 837.827 kb on - strand, within ABIE53_000775 at 837.827 kb on - strand, within ABIE53_000775 at 837.827 kb on - strand, within ABIE53_000775 at 837.827 kb on - strand, within ABIE53_000775 at 837.827 kb on - strand, within ABIE53_000775 at 837.874 kb on + strand, within ABIE53_000775 at 837.874 kb on + strand, within ABIE53_000775 at 837.874 kb on + strand, within ABIE53_000775 at 837.875 kb on - strand, within ABIE53_000775 at 837.875 kb on - strand, within ABIE53_000775 at 837.934 kb on - strand, within ABIE53_000775 at 837.934 kb on - strand, within ABIE53_000775 at 838.153 kb on + strand at 838.153 kb on + strand at 838.153 kb on + strand at 838.153 kb on + strand at 838.266 kb on + strand at 838.268 kb on + strand at 838.268 kb on + strand at 838.268 kb on + strand at 838.268 kb on + strand at 838.268 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.326 kb on + strand at 838.332 kb on + strand at 838.476 kb on + strand, within ABIE53_000776 at 838.476 kb on + strand, within ABIE53_000776 at 838.476 kb on + strand, within ABIE53_000776 at 838.476 kb on + strand, within ABIE53_000776 at 838.701 kb on + strand at 838.701 kb on + strand at 838.704 kb on + strand at 838.704 kb on + strand at 838.704 kb on + strand at 838.704 kb on + strand at 838.704 kb on + strand at 838.771 kb on + strand at 838.771 kb on + strand at 838.771 kb on + strand at 839.079 kb on + strand, within ABIE53_000777 at 839.079 kb on + strand, within ABIE53_000777 at 839.175 kb on + strand, within ABIE53_000777 at 839.175 kb on + strand, within ABIE53_000777 at 839.175 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.177 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.250 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.349 kb on + strand, within ABIE53_000777 at 839.427 kb on + strand at 839.427 kb on + strand at 839.427 kb on + strand at 839.427 kb on + strand at 839.427 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 837,409 + -0.4 837,410 - +0.4 837,434 + -0.5 837,434 + +0.3 837,435 - -0.5 837,435 - -0.8 837,435 - -0.2 837,661 + ABIE53_000775 0.32 -2.0 837,661 + ABIE53_000775 0.32 -0.1 837,661 + ABIE53_000775 0.32 -0.1 837,661 + ABIE53_000775 0.32 -0.7 837,796 + ABIE53_000775 0.53 +1.3 837,796 + ABIE53_000775 0.53 -0.7 837,796 + ABIE53_000775 0.53 -0.6 837,796 + ABIE53_000775 0.53 -0.3 837,796 + ABIE53_000775 0.53 +0.9 837,797 - ABIE53_000775 0.53 -1.3 837,797 - ABIE53_000775 0.53 +0.6 837,797 - ABIE53_000775 0.53 -0.6 837,797 - ABIE53_000775 0.53 -0.7 837,797 - ABIE53_000775 0.53 +0.6 837,797 - ABIE53_000775 0.53 -0.3 837,826 + ABIE53_000775 0.58 -0.4 837,826 + ABIE53_000775 0.58 -0.9 837,826 + ABIE53_000775 0.58 -0.5 837,826 + ABIE53_000775 0.58 -0.6 837,826 + ABIE53_000775 0.58 -0.6 837,827 - ABIE53_000775 0.58 -0.9 837,827 - ABIE53_000775 0.58 -0.6 837,827 - ABIE53_000775 0.58 -0.2 837,827 - ABIE53_000775 0.58 -1.5 837,827 - ABIE53_000775 0.58 +0.8 837,874 + ABIE53_000775 0.65 +0.7 837,874 + ABIE53_000775 0.65 +0.4 837,874 + ABIE53_000775 0.65 +0.5 837,875 - ABIE53_000775 0.65 -0.4 837,875 - ABIE53_000775 0.65 +0.4 837,934 - ABIE53_000775 0.75 +0.3 837,934 - ABIE53_000775 0.75 -0.4 838,153 + -0.3 838,153 + +1.1 838,153 + +0.1 838,153 + -1.1 838,266 + -0.8 838,268 + -0.0 838,268 + -0.4 838,268 + -0.3 838,268 + -0.7 838,268 + +0.2 838,326 + +0.6 838,326 + +0.0 838,326 + -0.7 838,326 + -0.4 838,326 + -0.7 838,326 + -0.4 838,326 + -0.2 838,326 + -1.6 838,326 + -0.9 838,326 + -0.4 838,326 + +0.2 838,326 + -0.7 838,332 + +0.0 838,476 + ABIE53_000776 0.41 -1.9 838,476 + ABIE53_000776 0.41 +0.9 838,476 + ABIE53_000776 0.41 -1.3 838,476 + ABIE53_000776 0.41 -0.1 838,701 + -1.2 838,701 + +0.2 838,704 + +0.4 838,704 + -0.5 838,704 + -0.5 838,704 + -0.0 838,704 + -0.0 838,771 + +2.0 838,771 + -0.8 838,771 + +0.6 839,079 + ABIE53_000777 0.46 +0.4 839,079 + ABIE53_000777 0.46 -0.2 839,175 + ABIE53_000777 0.61 -1.4 839,175 + ABIE53_000777 0.61 -0.2 839,175 + ABIE53_000777 0.61 -0.4 839,177 + ABIE53_000777 0.61 +0.2 839,177 + ABIE53_000777 0.61 +2.1 839,177 + ABIE53_000777 0.61 -1.0 839,177 + ABIE53_000777 0.61 +0.2 839,177 + ABIE53_000777 0.61 +0.7 839,177 + ABIE53_000777 0.61 -0.0 839,177 + ABIE53_000777 0.61 -1.3 839,177 + ABIE53_000777 0.61 +0.0 839,250 + ABIE53_000777 0.72 +0.6 839,250 + ABIE53_000777 0.72 +1.6 839,250 + ABIE53_000777 0.72 +0.6 839,250 + ABIE53_000777 0.72 -0.9 839,250 + ABIE53_000777 0.72 -1.0 839,250 + ABIE53_000777 0.72 +0.2 839,349 + ABIE53_000777 0.88 -0.8 839,349 + ABIE53_000777 0.88 -0.8 839,349 + ABIE53_000777 0.88 -1.1 839,349 + ABIE53_000777 0.88 -0.4 839,349 + ABIE53_000777 0.88 -0.4 839,349 + ABIE53_000777 0.88 -1.1 839,349 + ABIE53_000777 0.88 +0.4 839,349 + ABIE53_000777 0.88 -0.4 839,349 + ABIE53_000777 0.88 -1.0 839,349 + ABIE53_000777 0.88 -0.6 839,349 + ABIE53_000777 0.88 -0.6 839,349 + ABIE53_000777 0.88 -1.1 839,427 + +0.6 839,427 + +0.1 839,427 + +0.2 839,427 + -0.8 839,427 + -0.4
Or see this region's nucleotide sequence