Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4087

Experiment: BHIS with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 2 vol%
5,332,047	-		BT4085	0.76	-0.9
5,332,103	+		BT4085	0.79	-2.4
5,332,138	-		BT4085	0.81	+1.0
5,332,139	+		BT4085	0.81	-0.0
5,332,139	+		BT4085	0.81	-1.5
5,332,139	+		BT4085	0.81	-1.6
5,332,140	-		BT4085	0.81	-0.4
5,332,140	-		BT4085	0.81	+0.2
5,332,140	-		BT4085	0.81	-1.0
5,332,145	-		BT4085	0.81	-2.0
5,332,175	-		BT4085	0.83	-0.4
5,332,175	-		BT4085	0.83	-1.6
5,332,298	-		BT4085	0.89	-1.5
5,332,298	-		BT4085	0.89	-0.8
5,332,298	-		BT4085	0.89	-1.7
5,332,328	+				-1.4
5,332,329	-				-1.6
5,332,331	+				-0.8
5,332,332	-				+1.0
5,332,407	-				+1.0
5,332,446	-				-1.7
5,332,446	-				-2.0
5,332,446	-				-1.0
5,332,622	+		BT4086	0.21	-0.6
5,332,623	-		BT4086	0.21	-3.4
5,332,675	-		BT4086	0.33	-0.0
5,332,692	+		BT4086	0.37	-2.1
5,332,693	-		BT4086	0.37	-1.4
5,332,748	+		BT4086	0.49	-0.4
5,332,751	-		BT4086	0.50	-0.6
5,332,763	+		BT4086	0.52	-2.0
5,332,865	-		BT4086	0.75	-1.0
5,332,866	+		BT4086	0.75	-1.6
5,332,921	+		BT4086	0.87	-0.6
5,333,132	-		BT4087	0.13	-2.2
5,333,136	+		BT4087	0.13	-1.6
5,333,137	-		BT4087	0.13	-1.4
5,333,137	-		BT4087	0.13	-3.1
5,333,211	+		BT4087	0.20	-1.2
5,333,285	-		BT4087	0.27	-1.6
5,333,345	-		BT4087	0.33	-0.9
5,333,353	-		BT4087	0.34	-0.0
5,333,391	-		BT4087	0.38	-0.8
5,333,430	+		BT4087	0.41	-1.0
5,333,443	+		BT4087	0.42	-0.8
5,333,444	-		BT4087	0.43	+1.0
5,333,473	-		BT4087	0.45	+1.0
5,333,473	-		BT4087	0.45	-0.6
5,333,473	-		BT4087	0.45	-1.0
5,333,476	-		BT4087	0.46	-0.6
5,333,485	-		BT4087	0.46	-0.0
5,333,613	-		BT4087	0.59	-0.0
5,333,654	-		BT4087	0.62	-0.9
5,333,693	-		BT4087	0.66	-2.1
5,333,697	-		BT4087	0.67	-1.3
5,333,756	-		BT4087	0.72	-0.6
5,333,760	-		BT4087	0.73	-0.6
5,333,760	-		BT4087	0.73	-1.4
5,333,760	-		BT4087	0.73	-1.6
5,333,766	+		BT4087	0.73	-1.1
5,333,774	-		BT4087	0.74	+1.0
5,333,774	-		BT4087	0.74	-0.3
5,333,792	+		BT4087	0.76	-1.0
5,333,795	-		BT4087	0.76	+1.0
5,333,795	-		BT4087	0.76	-2.0
5,333,923	+		BT4087	0.88	-1.7
5,333,952	-				-1.4
5,333,956	-				-0.5
5,334,000	-				-0.6
5,334,000	-				-2.0
5,334,011	+				-0.6
5,334,046	+				-0.0
5,334,099	+				-1.0
5,334,125	+				-0.8
5,334,192	+				-1.2
5,334,196	-				-0.4
5,334,196	-				+1.0
5,334,218	-				-1.2
5,334,242	+				-0.6
5,334,258	+				-1.4
5,334,292	-				-0.0
5,334,310	-				-0.0
5,334,350	+				+1.0
5,334,350	+				-0.5
5,334,350	+				-0.3
5,334,469	-		BT4088	0.13	+0.4
5,334,469	-		BT4088	0.13	-0.6
5,334,482	+		BT4088	0.13	-0.4
5,334,483	-		BT4088	0.13	-0.8
5,334,504	+		BT4088	0.14	+1.0
5,334,552	-		BT4088	0.15	-0.9
5,334,577	-		BT4088	0.16	-0.9
5,334,601	-		BT4088	0.17	-0.6
5,334,674	-		BT4088	0.19	-0.6
5,334,674	-		BT4088	0.19	-1.4
5,334,681	+		BT4088	0.19	-0.4
5,334,681	+		BT4088	0.19	+1.5
5,334,693	+		BT4088	0.20	-1.9
5,334,701	+		BT4088	0.20	-0.4
5,334,754	+		BT4088	0.22	-1.5
5,334,759	+		BT4088	0.22	-0.0
5,334,774	+		BT4088	0.22	+0.2
5,334,785	+		BT4088	0.23	-0.0
5,334,814	-		BT4088	0.24	-1.4
5,334,851	+		BT4088	0.25	-0.5
5,334,855	+		BT4088	0.25	+0.5
5,334,891	-		BT4088	0.26	-0.6
5,334,965	-		BT4088	0.28	-0.6
5,334,965	-		BT4088	0.28	-0.4
5,335,030	-		BT4088	0.31	-0.4