Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2457

Experiment: BHIS with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 2 vol%
3,072,446	+		BT2456	0.81	-0.5
3,072,446	+		BT2456	0.81	-0.7
3,072,448	+		BT2456	0.82	-0.6
3,072,448	+		BT2456	0.82	-0.3
3,072,449	-		BT2456	0.82	-0.8
3,072,526	-				-0.6
3,072,558	+				-1.7
3,072,568	+				+2.0
3,072,568	+				-0.8
3,072,569	-				-0.7
3,072,569	-				+0.2
3,072,573	-				+2.0
3,072,604	+				-0.0
3,072,604	+				+1.0
3,072,612	-				-1.2
3,072,662	+				-1.1
3,072,663	-				-0.6
3,072,706	+				-1.8
3,072,723	-				+0.7
3,072,725	-				-1.6
3,072,737	+				-2.3
3,072,755	+				-1.3
3,072,755	+				-0.6
3,072,756	-				+1.0
3,072,759	+				-0.0
3,072,760	-				-0.0
3,072,760	-				-2.0
3,072,760	-				-0.0
3,072,787	+				-2.4
3,072,799	+				-1.3
3,072,800	-				+0.3
3,072,800	-				-1.3
3,072,806	+				-0.8
3,072,809	+				-2.0
3,072,856	+				-0.5
3,072,871	+				-0.9
3,072,909	+				-1.9
3,072,928	+				-1.3
3,072,929	-				-1.0
3,072,929	-				-1.5
3,072,937	+				-1.6
3,072,943	-				-1.3
3,073,014	+				-1.0
3,073,108	+				+0.2
3,073,108	+				-0.0
3,073,108	+				-1.0
3,073,109	-				-0.7
3,073,109	-				-1.3
3,073,135	+				-1.6
3,073,142	-				-0.7
3,073,252	-				-0.7
3,073,252	-				-1.2
3,073,272	-				-1.9
3,073,289	+				-0.0
3,073,333	-				-0.9
3,073,333	-				-0.3
3,073,367	+				-1.1
3,073,407	+				-1.8
3,073,408	-				-0.7
3,073,408	-				-0.0
3,073,408	-				-0.8
3,073,430	+				+1.0
3,073,475	+				+1.0
3,073,504	+				-0.9
3,073,505	-				+0.4
3,073,520	-				-1.0
3,073,529	-				-1.0
3,073,529	-				-0.5
3,073,583	+		BT2457	0.14	+0.6
3,073,583	+		BT2457	0.14	-0.5
3,073,584	-		BT2457	0.14	+1.0
3,073,584	-		BT2457	0.14	-1.3
3,073,634	-		BT2457	0.18	-2.3
3,073,647	-		BT2457	0.19	-1.7
3,073,738	+		BT2457	0.27	-0.6
3,073,739	-		BT2457	0.27	-0.7
3,073,792	-		BT2457	0.32	-0.8
3,073,801	-		BT2457	0.32	-0.7
3,073,808	-		BT2457	0.33	+1.0
3,073,852	+		BT2457	0.37	-0.5
3,073,864	+		BT2457	0.38	-1.1
3,073,865	-		BT2457	0.38	-0.8
3,073,865	-		BT2457	0.38	-1.8
3,073,869	+		BT2457	0.38	-1.2
3,073,897	-		BT2457	0.41	-0.8
3,073,980	+		BT2457	0.48	-0.9
3,073,981	-		BT2457	0.48	-2.6
3,074,023	+		BT2457	0.51	-1.3
3,074,023	+		BT2457	0.51	-2.2
3,074,050	+		BT2457	0.54	-0.9
3,074,054	+		BT2457	0.54	-0.0
3,074,068	+		BT2457	0.55	-0.2
3,074,068	+		BT2457	0.55	+0.1
3,074,069	-		BT2457	0.55	-0.7
3,074,069	-		BT2457	0.55	-1.1
3,074,069	-		BT2457	0.55	-0.1
3,074,069	-		BT2457	0.55	-0.6
3,074,069	-		BT2457	0.55	-0.0
3,074,077	+		BT2457	0.56	-0.4
3,074,120	+		BT2457	0.60	-0.6
3,074,150	+		BT2457	0.62	-0.6
3,074,150	+		BT2457	0.62	-1.0
3,074,150	+		BT2457	0.62	+0.4
3,074,151	-		BT2457	0.62	-1.9
3,074,151	-		BT2457	0.62	-1.6
3,074,226	+		BT2457	0.69	-1.0
3,074,227	-		BT2457	0.69	-0.6
3,074,227	-		BT2457	0.69	-0.0
3,074,253	+		BT2457	0.71	-1.3
3,074,254	-		BT2457	0.71	-1.4
3,074,264	-		BT2457	0.72	-0.0
3,074,272	+		BT2457	0.73	-1.0
3,074,273	-		BT2457	0.73	-1.3
3,074,362	+		BT2457	0.80	-1.7
3,074,362	+		BT2457	0.80	+0.6
3,074,363	-		BT2457	0.81	-2.6
3,074,378	-		BT2457	0.82	-1.0
3,074,453	+		BT2457	0.88	-1.1
3,074,456	-		BT2457	0.88	-1.3
3,074,456	-		BT2457	0.88	-0.7
3,074,478	-				-0.6
3,074,478	-				-2.8
3,074,478	-				-1.0
3,074,478	-				-1.5
3,074,514	+				+0.4
3,074,515	-				-0.3
3,074,515	-				-2.9
3,074,529	-				-0.7
3,074,529	-				-1.7
3,074,570	-				-0.8
3,074,570	-				+0.7
3,074,574	-				-0.5
3,074,574	-				-0.9
3,074,595	-				-0.2
3,074,595	-				+0.1
3,074,677	+				-0.2
3,074,678	-				-2.1
3,074,678	-				-0.3
3,074,683	+				+0.4
3,074,683	+				+0.1
3,074,683	+				+1.0
3,074,724	-				-0.3
3,074,725	+				-1.0
3,074,725	+				-1.0
3,074,794	+				-0.6
3,074,795	-				+0.3
3,074,798	-				-0.6
3,074,803	+				+1.0
3,074,804	-				-0.0
3,074,857	-				-1.8
3,074,873	+		BT2458	0.10	+0.1
3,074,879	+		BT2458	0.10	-0.5
3,074,927	+		BT2458	0.13	-1.8
3,075,092	+		BT2458	0.22	+1.0
3,075,132	+		BT2458	0.24	-1.6
3,075,154	+		BT2458	0.25	+0.4
3,075,154	+		BT2458	0.25	-0.6
3,075,196	+		BT2458	0.27	-1.9
3,075,260	-		BT2458	0.31	-1.0
3,075,276	+		BT2458	0.32	+0.4
3,075,282	+		BT2458	0.32	+1.6
3,075,300	+		BT2458	0.33	-1.0
3,075,361	+		BT2458	0.36	-0.0
3,075,421	+		BT2458	0.39	-1.1
3,075,479	+		BT2458	0.42	-0.6
3,075,480	-		BT2458	0.42	-1.3
3,075,498	+		BT2458	0.43	-0.8
3,075,499	-		BT2458	0.43	-1.8
3,075,500	+		BT2458	0.43	-1.0
3,075,537	-		BT2458	0.45	-1.0