Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04617 and H281DRAFT_04618 are separated by 236 nucleotides H281DRAFT_04618 and H281DRAFT_04619 are separated by 72 nucleotides H281DRAFT_04619 and H281DRAFT_04620 are separated by 76 nucleotides
H281DRAFT_04617: H281DRAFT_04617 - Thiopurine S-methyltransferase (TPMT), at 11,524 to 12,147
_04617
H281DRAFT_04618: H281DRAFT_04618 - putative regulatory protein, FmdB family, at 12,384 to 12,764
_04618
H281DRAFT_04619: H281DRAFT_04619 - Uncharacterized membrane protein, at 12,837 to 13,490
_04619
H281DRAFT_04620: H281DRAFT_04620 - aspartyl-tRNA synthetase, at 13,567 to 15,366
_04620
Position (kb) 12
13
14 Strain fitness (log2 ratio) -2
-1
0
1 at 11.848 kb on + strand, within H281DRAFT_04617 at 11.848 kb on + strand, within H281DRAFT_04617 at 11.848 kb on + strand, within H281DRAFT_04617 at 11.878 kb on + strand, within H281DRAFT_04617 at 11.878 kb on + strand, within H281DRAFT_04617 at 11.879 kb on - strand, within H281DRAFT_04617 at 11.927 kb on - strand, within H281DRAFT_04617 at 12.177 kb on + strand at 12.178 kb on - strand at 12.200 kb on - strand at 12.200 kb on - strand at 12.333 kb on + strand at 12.335 kb on + strand at 12.335 kb on + strand at 12.393 kb on + strand at 12.393 kb on + strand at 12.393 kb on + strand at 12.543 kb on + strand, within H281DRAFT_04618 at 13.140 kb on + strand, within H281DRAFT_04619 at 13.218 kb on + strand, within H281DRAFT_04619 at 13.238 kb on + strand, within H281DRAFT_04619 at 13.311 kb on + strand, within H281DRAFT_04619 at 13.311 kb on + strand, within H281DRAFT_04619 at 13.410 kb on + strand, within H281DRAFT_04619 at 13.410 kb on + strand, within H281DRAFT_04619 at 13.488 kb on + strand at 13.542 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 11,848 + H281DRAFT_04617 0.52 -0.2 11,848 + H281DRAFT_04617 0.52 -0.2 11,848 + H281DRAFT_04617 0.52 +0.3 11,878 + H281DRAFT_04617 0.57 -0.8 11,878 + H281DRAFT_04617 0.57 +0.3 11,879 - H281DRAFT_04617 0.57 +0.4 11,927 - H281DRAFT_04617 0.65 -0.3 12,177 + -0.1 12,178 - -0.1 12,200 - +0.4 12,200 - +0.1 12,333 + -0.4 12,335 + -0.8 12,335 + +0.2 12,393 + +0.2 12,393 + -0.1 12,393 + -0.0 12,543 + H281DRAFT_04618 0.42 -0.9 13,140 + H281DRAFT_04619 0.46 -2.0 13,218 + H281DRAFT_04619 0.58 -0.4 13,238 + H281DRAFT_04619 0.61 +0.2 13,311 + H281DRAFT_04619 0.72 -1.4 13,311 + H281DRAFT_04619 0.72 -0.7 13,410 + H281DRAFT_04619 0.88 -0.6 13,410 + H281DRAFT_04619 0.88 -0.1 13,488 + -0.3 13,542 + -0.1
Or see this region's nucleotide sequence