Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04247

Experiment: 2-furoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04246 and H281DRAFT_04247 are separated by 224 nucleotidesH281DRAFT_04247 and H281DRAFT_04248 are separated by 19 nucleotides H281DRAFT_04246: H281DRAFT_04246 - glutathione S-transferase, at 365,189 to 365,803 _04246 H281DRAFT_04247: H281DRAFT_04247 - aminopeptidase P Metallo peptidase. MEROPS family M24B, at 366,028 to 367,419 _04247 H281DRAFT_04248: H281DRAFT_04248 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 367,439 to 368,809 _04248 Position (kb) 366 367 368Strain fitness (log2 ratio) -1 0 1at 365.109 kb on + strandat 365.159 kb on - strandat 365.207 kb on - strandat 365.207 kb on - strandat 365.207 kb on - strandat 365.213 kb on - strandat 365.213 kb on - strandat 365.343 kb on + strand, within H281DRAFT_04246at 365.344 kb on - strand, within H281DRAFT_04246at 365.596 kb on - strand, within H281DRAFT_04246at 365.725 kb on - strand, within H281DRAFT_04246at 365.836 kb on + strandat 365.836 kb on + strandat 365.837 kb on - strandat 366.016 kb on + strandat 366.193 kb on + strand, within H281DRAFT_04247at 366.193 kb on + strand, within H281DRAFT_04247at 366.193 kb on + strand, within H281DRAFT_04247at 366.193 kb on + strand, within H281DRAFT_04247at 366.199 kb on + strand, within H281DRAFT_04247at 366.199 kb on + strand, within H281DRAFT_04247at 366.199 kb on + strand, within H281DRAFT_04247at 366.199 kb on + strand, within H281DRAFT_04247at 366.200 kb on - strand, within H281DRAFT_04247at 366.200 kb on - strand, within H281DRAFT_04247at 366.202 kb on + strand, within H281DRAFT_04247at 366.680 kb on - strand, within H281DRAFT_04247at 366.739 kb on + strand, within H281DRAFT_04247at 366.739 kb on + strand, within H281DRAFT_04247at 366.740 kb on - strand, within H281DRAFT_04247at 366.740 kb on - strand, within H281DRAFT_04247at 366.741 kb on + strand, within H281DRAFT_04247at 366.741 kb on + strand, within H281DRAFT_04247at 366.741 kb on + strand, within H281DRAFT_04247at 367.108 kb on + strand, within H281DRAFT_04247at 367.108 kb on + strand, within H281DRAFT_04247at 367.108 kb on + strand, within H281DRAFT_04247at 367.108 kb on + strand, within H281DRAFT_04247at 367.109 kb on - strand, within H281DRAFT_04247at 367.110 kb on + strand, within H281DRAFT_04247at 367.110 kb on + strand, within H281DRAFT_04247at 367.111 kb on - strand, within H281DRAFT_04247at 367.111 kb on - strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.255 kb on + strand, within H281DRAFT_04247at 367.256 kb on - strand, within H281DRAFT_04247at 367.256 kb on - strand, within H281DRAFT_04247at 367.256 kb on - strand, within H281DRAFT_04247

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-furoic (C)
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365,109 + -0.2
365,159 - +0.1
365,207 - +0.1
365,207 - -0.1
365,207 - +0.6
365,213 - +0.3
365,213 - +0.9
365,343 + H281DRAFT_04246 0.25 -0.4
365,344 - H281DRAFT_04246 0.25 +0.6
365,596 - H281DRAFT_04246 0.66 +0.0
365,725 - H281DRAFT_04246 0.87 +0.0
365,836 + +0.3
365,836 + -1.6
365,837 - +0.3
366,016 + -0.9
366,193 + H281DRAFT_04247 0.12 -0.5
366,193 + H281DRAFT_04247 0.12 -0.8
366,193 + H281DRAFT_04247 0.12 +0.1
366,193 + H281DRAFT_04247 0.12 -0.2
366,199 + H281DRAFT_04247 0.12 -0.2
366,199 + H281DRAFT_04247 0.12 +0.1
366,199 + H281DRAFT_04247 0.12 +1.3
366,199 + H281DRAFT_04247 0.12 +0.4
366,200 - H281DRAFT_04247 0.12 +1.2
366,200 - H281DRAFT_04247 0.12 -1.5
366,202 + H281DRAFT_04247 0.12 +0.1
366,680 - H281DRAFT_04247 0.47 +0.6
366,739 + H281DRAFT_04247 0.51 +0.1
366,739 + H281DRAFT_04247 0.51 -0.1
366,740 - H281DRAFT_04247 0.51 -0.1
366,740 - H281DRAFT_04247 0.51 -0.9
366,741 + H281DRAFT_04247 0.51 +0.2
366,741 + H281DRAFT_04247 0.51 +0.0
366,741 + H281DRAFT_04247 0.51 -0.8
367,108 + H281DRAFT_04247 0.78 +0.5
367,108 + H281DRAFT_04247 0.78 -0.0
367,108 + H281DRAFT_04247 0.78 -0.4
367,108 + H281DRAFT_04247 0.78 +0.6
367,109 - H281DRAFT_04247 0.78 +0.5
367,110 + H281DRAFT_04247 0.78 +0.2
367,110 + H281DRAFT_04247 0.78 +0.3
367,111 - H281DRAFT_04247 0.78 -0.1
367,111 - H281DRAFT_04247 0.78 -0.7
367,255 + H281DRAFT_04247 0.88 -0.6
367,255 + H281DRAFT_04247 0.88 +0.0
367,255 + H281DRAFT_04247 0.88 +0.2
367,255 + H281DRAFT_04247 0.88 +0.4
367,255 + H281DRAFT_04247 0.88 -0.3
367,255 + H281DRAFT_04247 0.88 +0.2
367,255 + H281DRAFT_04247 0.88 +0.4
367,256 - H281DRAFT_04247 0.88 +0.1
367,256 - H281DRAFT_04247 0.88 -0.4
367,256 - H281DRAFT_04247 0.88 -0.1

Or see this region's nucleotide sequence