Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04232 and H281DRAFT_04234 are separated by 493 nucleotides H281DRAFT_04234 and H281DRAFT_04235 are separated by 222 nucleotides
H281DRAFT_04232: H281DRAFT_04232 - 3,4-dihydroxy 2-butanone 4-phosphate synthase, at 352,275 to 352,994
_04232
H281DRAFT_04234: H281DRAFT_04234 - transcriptional regulator, XRE family with cupin sensor, at 353,488 to 354,177
_04234
H281DRAFT_04235: H281DRAFT_04235 - MFS transporter, DHA1 family, arabinose polymer transporter, at 354,400 to 355,590
_04235
Position (kb) 353
354
355 Strain fitness (log2 ratio) -1
0
1 at 352.982 kb on + strand at 353.140 kb on + strand at 353.141 kb on - strand at 353.241 kb on - strand at 353.359 kb on + strand at 353.360 kb on - strand at 353.360 kb on - strand at 353.360 kb on - strand at 353.360 kb on - strand at 353.360 kb on - strand at 353.392 kb on + strand at 353.434 kb on - strand at 353.610 kb on + strand, within H281DRAFT_04234 at 353.610 kb on + strand, within H281DRAFT_04234 at 353.611 kb on - strand, within H281DRAFT_04234 at 354.218 kb on + strand at 354.232 kb on + strand at 354.232 kb on + strand at 354.233 kb on - strand at 354.233 kb on - strand at 354.233 kb on - strand at 354.264 kb on - strand at 354.278 kb on - strand at 354.363 kb on + strand at 354.363 kb on + strand at 354.363 kb on + strand at 354.363 kb on + strand at 354.364 kb on - strand at 354.529 kb on - strand, within H281DRAFT_04235 at 354.529 kb on - strand, within H281DRAFT_04235 at 354.874 kb on + strand, within H281DRAFT_04235 at 354.928 kb on - strand, within H281DRAFT_04235 at 354.929 kb on + strand, within H281DRAFT_04235 at 354.929 kb on + strand, within H281DRAFT_04235 at 354.930 kb on - strand, within H281DRAFT_04235 at 354.930 kb on - strand at 354.930 kb on - strand, within H281DRAFT_04235
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 352,982 + +0.0 353,140 + -0.3 353,141 - +0.6 353,241 - +0.3 353,359 + +0.7 353,360 - -1.1 353,360 - +0.5 353,360 - +0.9 353,360 - +0.4 353,360 - -0.4 353,392 + -0.1 353,434 - +0.7 353,610 + H281DRAFT_04234 0.18 +0.1 353,610 + H281DRAFT_04234 0.18 -0.8 353,611 - H281DRAFT_04234 0.18 -0.6 354,218 + +0.2 354,232 + -0.0 354,232 + +0.2 354,233 - +0.8 354,233 - -0.7 354,233 - +0.9 354,264 - -0.3 354,278 - +1.6 354,363 + -1.1 354,363 + +0.2 354,363 + -0.0 354,363 + -0.3 354,364 - -0.1 354,529 - H281DRAFT_04235 0.11 +0.4 354,529 - H281DRAFT_04235 0.11 +0.1 354,874 + H281DRAFT_04235 0.40 +0.1 354,928 - H281DRAFT_04235 0.44 +0.4 354,929 + H281DRAFT_04235 0.44 +0.4 354,929 + H281DRAFT_04235 0.44 +0.1 354,930 - H281DRAFT_04235 0.45 -0.5 354,930 - -0.8 354,930 - H281DRAFT_04235 0.45 -0.4
Or see this region's nucleotide sequence