Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03800 and H281DRAFT_03801 are separated by 226 nucleotides H281DRAFT_03801 and H281DRAFT_03802 overlap by 11 nucleotides H281DRAFT_03802 and H281DRAFT_03803 are separated by 86 nucleotides
H281DRAFT_03800: H281DRAFT_03800 - NitT/TauT family transport system substrate-binding protein, at 320,839 to 321,858
_03800
H281DRAFT_03801: H281DRAFT_03801 - two component transcriptional regulator, winged helix family, at 322,085 to 322,822
_03801
H281DRAFT_03802: H281DRAFT_03802 - two-component system, OmpR family, sensor histidine kinase TctE, at 322,812 to 324,206
_03802
H281DRAFT_03803: H281DRAFT_03803 - alcohol dehydrogenase, at 324,293 to 325,456
_03803
Position (kb) 322
323
324
325 Strain fitness (log2 ratio) -1
0
1 at 321.929 kb on + strand at 322.033 kb on + strand at 322.633 kb on + strand, within H281DRAFT_03801 at 322.721 kb on + strand, within H281DRAFT_03801 at 322.724 kb on - strand, within H281DRAFT_03801 at 322.820 kb on + strand at 322.820 kb on + strand at 322.870 kb on - strand at 322.870 kb on - strand at 322.870 kb on - strand at 322.897 kb on - strand at 323.164 kb on + strand, within H281DRAFT_03802 at 323.288 kb on - strand, within H281DRAFT_03802 at 323.288 kb on - strand, within H281DRAFT_03802 at 323.559 kb on - strand, within H281DRAFT_03802 at 324.155 kb on + strand at 324.292 kb on - strand at 324.628 kb on - strand, within H281DRAFT_03803 at 324.628 kb on - strand, within H281DRAFT_03803 at 324.839 kb on - strand, within H281DRAFT_03803 at 324.839 kb on - strand, within H281DRAFT_03803 at 324.841 kb on - strand, within H281DRAFT_03803 at 325.007 kb on + strand, within H281DRAFT_03803
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 321,929 + +0.0 322,033 + -0.2 322,633 + H281DRAFT_03801 0.74 +0.6 322,721 + H281DRAFT_03801 0.86 +0.2 322,724 - H281DRAFT_03801 0.87 -0.0 322,820 + +0.2 322,820 + -0.3 322,870 - +0.2 322,870 - -1.3 322,870 - +0.6 322,897 - -0.2 323,164 + H281DRAFT_03802 0.25 +0.1 323,288 - H281DRAFT_03802 0.34 +0.6 323,288 - H281DRAFT_03802 0.34 +0.4 323,559 - H281DRAFT_03802 0.54 +1.6 324,155 + +0.1 324,292 - -0.3 324,628 - H281DRAFT_03803 0.29 -0.2 324,628 - H281DRAFT_03803 0.29 -0.7 324,839 - H281DRAFT_03803 0.47 +0.1 324,839 - H281DRAFT_03803 0.47 +1.0 324,841 - H281DRAFT_03803 0.47 +0.2 325,007 + H281DRAFT_03803 0.61 +0.7
Or see this region's nucleotide sequence