Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01002 and H281DRAFT_01003 are separated by 63 nucleotides H281DRAFT_01003 and H281DRAFT_01004 are separated by 556 nucleotides H281DRAFT_01004 and H281DRAFT_01005 are separated by 349 nucleotides
H281DRAFT_01002: H281DRAFT_01002 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 1,127,799 to 1,129,046
_01002
H281DRAFT_01003: H281DRAFT_01003 - hypothetical protein, at 1,129,110 to 1,129,274
_01003
H281DRAFT_01004: H281DRAFT_01004 - putative iron-dependent peroxidase, at 1,129,831 to 1,130,799
_01004
H281DRAFT_01005: H281DRAFT_01005 - PilZ domain-containing protein, at 1,131,149 to 1,132,036
_01005
Position (kb)
1129
1130
1131 Strain fitness (log2 ratio)
-1
0
1 at 1129.274 kb on + strand at 1129.296 kb on - strand at 1129.358 kb on - strand at 1129.358 kb on - strand at 1129.383 kb on - strand at 1129.393 kb on + strand at 1129.423 kb on + strand at 1129.424 kb on - strand at 1129.591 kb on - strand at 1130.327 kb on + strand, within H281DRAFT_01004 at 1130.328 kb on - strand, within H281DRAFT_01004 at 1130.328 kb on - strand, within H281DRAFT_01004 at 1130.399 kb on - strand, within H281DRAFT_01004 at 1130.563 kb on - strand, within H281DRAFT_01004 at 1130.617 kb on + strand, within H281DRAFT_01004 at 1130.618 kb on - strand, within H281DRAFT_01004 at 1130.618 kb on - strand, within H281DRAFT_01004 at 1130.698 kb on + strand, within H281DRAFT_01004 at 1130.731 kb on - strand at 1131.135 kb on + strand at 1131.495 kb on - strand, within H281DRAFT_01005
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 1,129,274 + -0.6 1,129,296 - +0.1 1,129,358 - +0.6 1,129,358 - +0.3 1,129,383 - +0.3 1,129,393 + +0.3 1,129,423 + +0.7 1,129,424 - +0.3 1,129,591 - +0.5 1,130,327 + H281DRAFT_01004 0.51 -0.7 1,130,328 - H281DRAFT_01004 0.51 +0.3 1,130,328 - H281DRAFT_01004 0.51 +0.0 1,130,399 - H281DRAFT_01004 0.59 -0.0 1,130,563 - H281DRAFT_01004 0.76 +0.7 1,130,617 + H281DRAFT_01004 0.81 -0.2 1,130,618 - H281DRAFT_01004 0.81 +0.3 1,130,618 - H281DRAFT_01004 0.81 +0.3 1,130,698 + H281DRAFT_01004 0.89 -0.4 1,130,731 - +0.4 1,131,135 + +0.2 1,131,495 - H281DRAFT_01005 0.39 +0.4
Or see this region's nucleotide sequence